dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS201

Inhibited defense system

CLAN ID

CLAN012

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300008114_000032\|3300008114\|Ga0114347_100011773	gene_page:	131	14390.5	7.9145	3

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF10686

Phrog

phrog_687,phrog_29,phrog_2998,phrog_543,phrog_428

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending AVAST type III because it belongs to the same clan as family APIS354 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS201	IMGVR_UViG_3300008114_000032\|3300008114\|Ga0114347_100011773	4	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN012

APIS201 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300008114_000032\|3300008114\|Ga0114347_100011773	100.000	2.512E-88	280	1.000%	IMGVR	PF10686	phrog_687 phrog_29 phrog_2998 phrog_543 phrog_428
IMGVR_UViG_3300031857_000157\|3300031857\|Ga0315909_1000031869	86.900	4.616E-74	239	0.992%	IMGVR	PF10686	phrog_687 phrog_29 phrog_2998 phrog_543 phrog_428
IMGVR_UViG_3300042691_017119\|3300042691\|Ga0415385_0001789_14460_14840	86.700	9.041E-71	229	0.955%	IMGVR	PF10686	phrog_687 phrog_29 phrog_2998 phrog_543 phrog_428
IMGVR_UViG_3300031758_000078\|3300031758\|Ga0315907_1000042610	100.000	1.832E-88	280	0.992%	IMGVR	PF10686	phrog_687 phrog_29 phrog_2998 phrog_543 phrog_428