Information for CAZyme ID: WIA41145.1
Basic Information
| GenBank ID | WIA41145.1 |
| Family | CBM20 |
| Sequence Length | 1141 |
| UniProt ID | WIA41145.1(MOD) |
| Average pLDDT? | 50.28 |
| CAZy50 ID | 9237 |
| CAZy50 Rep | Yes, WIA41145.1 |
| Structure Cluster | SC_CBM20_clus10 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 3088 |
| Kingdom | Eukaryota |
| Phylum | Chlorophyta |
| Class | Chlorophyceae |
| Order | Sphaeropleales |
| Family | Scenedesmaceae |
| Genus | Tetradesmus |
| Species | Tetradesmus obliquus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MLVLGVGPLS RPLTQGGRHR LSKGLPHKGR ALQRRRYVAV RAIAQPETAE RLAPAAPSLS | 60 |
| SAADDAAGNP ELLASSRAEM LESLTGPIVK ISVRYHTDFG DCMKVIGSSA ELGAWDAAAA | 120 |
| PLMVWGEGDI WSLVLPFSSG EHEFKVVVQK SGGELLWEGG DNRKVVVPED APAGSMLVAE | 180 |
| CSFNFSEQME EPELEPLSEE VVAALQQQAE ATAAAELQAA ASEGTRASKV SEAAAAIASA | 240 |
| MMSMDVEAEV TGRRPSFSGE PTAASTPAAA SPASSDSEDS QDDELLSAAT GASGGLSKAL | 300 |
| AAAQDELLVE EDEASAAAES EMQQQLEAMA AQARASMDEG ITTSFDELAD DFVMPAAPAP | 360 |
| PSPADSLRSK LSQDKPVAVG FIDFSASRQP AGKPAAADPA STNSVVAAFM KSVSKKASAA | 420 |
| PLPTAAELAA AELAAAAEPA AAEPAAAAAP EIPSPPEEAA ADLEPAEESA VAAAAAALAA | 480 |
| AAAALSDVDE ETDSAAELEP AAAVEVLEPA AAVLEVEEAE EVAAVAETLA PAAAAVEEEV | 540 |
| EEVTAAAAVE AADPAVLAVL AEAAAAAEKV LEDESRSAPA TPDNSPPDSG SATPAAAVAA | 600 |
| AAAALPSGWG PSAVSSSSSS STAGSTAMDS SMGSAAADSA AASPDWNSGM QLMSAIAGCA | 660 |
| AVGTVLWSEF VLKDTGCGLP PGPYGLLGAA EGISYLTVLG FAGAGAAARG ASGGKAGLPG | 720 |
| ALKVPEVLAY GALAAGLFVL ASQLREYGYI PPPLPGGQCY PDAAVMPLPG TAGLSAQLAA | 780 |
| QLAALQGILH QLQSSAADGI DQLALQEQLA ALQQQADTFS AYVAQQTSTV DASLRAGLLQ | 840 |
| LQDSLASATD AVSSFADTQL QQLDIPGKLA FVLDVLKQQE QALVVELPKQ FAELQQLAAT | 900 |
| SVGLLQETAS QAANGLHLPE LLASLDRSMG ALHDVLEVRI QQLDVVLSQL HDSCSAAATQ | 960 |
| LAAAAFAAQQ AGATDAAAQL NSLQQLLSGA IASVQEQVWA GYQQLALADH LRQQLQVAGS | 1020 |
| SLGQFSGSAV DFASGGLTGV QQSVEATVKA AASGVDVASQ QMQAASSSIG QLSGSAADFA | 1080 |
| SSSLSSAVKL AEPAANAATA ALDVGPAELV GEPSYYKVYD NVIDLDNASD AIKEIWANRP | 1140 |
| Q | 1141 |
Predicted 3D structure by AlphaFold2 with pLDDT = 50.28 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MLVLGVGPLS RPLTQGGRHR LSKGLPHKGR ALQRRRYVAV RAIAQPETAE RLAPAAPSLS | 60 |
| SAADDAAGNP ELLASSRAEM LESLTGPIVK ISVRYHTDFG DCMKVIGSSA ELGAWDAAAA | 120 |
| PLMVWGEGDI WSLVLPFSSG EHEFKVVVQK SGGELLWEGG DNRKVVVPED APAGSMLVAE | 180 |
| CSFNFSEQME EPELEPLSEE VVAALQQQAE ATAAAELQAA ASEGTRASKV SEAAAAIASA | 240 |
| MMSMDVEAEV TGRRPSFSGE PTAASTPAAA SPASSDSEDS QDDELLSAAT GASGGLSKAL | 300 |
| AAAQDELLVE EDEASAAAES EMQQQLEAMA AQARASMDEG ITTSFDELAD DFVMPAAPAP | 360 |
| PSPADSLRSK LSQDKPVAVG FIDFSASRQP AGKPAAADPA STNSVVAAFM KSVSKKASAA | 420 |
| PLPTAAELAA AELAAAAEPA AAEPAAAAAP EIPSPPEEAA ADLEPAEESA VAAAAAALAA | 480 |
| AAAALSDVDE ETDSAAELEP AAAVEVLEPA AAVLEVEEAE EVAAVAETLA PAAAAVEEEV | 540 |
| EEVTAAAAVE AADPAVLAVL AEAAAAAEKV LEDESRSAPA TPDNSPPDSG SATPAAAVAA | 600 |
| AAAALPSGWG PSAVSSSSSS STAGSTAMDS SMGSAAADSA AASPDWNSGM QLMSAIAGCA | 660 |
| AVGTVLWSEF VLKDTGCGLP PGPYGLLGAA EGISYLTVLG FAGAGAAARG ASGGKAGLPG | 720 |
| ALKVPEVLAY GALAAGLFVL ASQLREYGYI PPPLPGGQCY PDAAVMPLPG TAGLSAQLAA | 780 |
| QLAALQGILH QLQSSAADGI DQLALQEQLA ALQQQADTFS AYVAQQTSTV DASLRAGLLQ | 840 |
| LQDSLASATD AVSSFADTQL QQLDIPGKLA FVLDVLKQQE QALVVELPKQ FAELQQLAAT | 900 |
| SVGLLQETAS QAANGLHLPE LLASLDRSMG ALHDVLEVRI QQLDVVLSQL HDSCSAAATQ | 960 |
| LAAAAFAAQQ AGATDAAAQL NSLQQLLSGA IASVQEQVWA GYQQLALADH LRQQLQVAGS | 1020 |
| SLGQFSGSAV DFASGGLTGV QQSVEATVKA AASGVDVASQ QMQAASSSIG QLSGSAADFA | 1080 |
| SSSLSSAVKL AEPAANAATA ALDVGPAELV GEPSYYKVYD NVIDLDNASD AIKEIWANRP | 1140 |
| Q | 1141 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.