Information for CAZyme ID: WIA28664.1
Basic Information
| GenBank ID | WIA28664.1 |
| Family | GH79 |
| Sequence Length | 585 |
| UniProt ID | A0A383VVL4(98.5,89.7) |
| Average pLDDT? | 66.15 |
| CAZy50 ID | 54517 |
| CAZy50 Rep | Yes, WIA28664.1 |
| Structure Cluster | SC_GH79_clus2 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 3088 |
| Kingdom | Eukaryota |
| Phylum | Chlorophyta |
| Class | Chlorophyceae |
| Order | Sphaeropleales |
| Family | Scenedesmaceae |
| Genus | Tetradesmus |
| Species | Tetradesmus obliquus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MNTSGLFAAA KLANRPVSAC IIVLSALLIT TSAVADKLDG GSGLQTALTQ GVLKPQLAVA | 60 |
| SSTRLLPQQP VFDEEYTPGD NSAAFQGPDA PLPAVPAVPS PAAPAAPQEA TAPLYVTPPA | 120 |
| SFESLTEVNL DQPLLQIPQS FLGISHEWTH VEEINNIPGY KDSIRLLTSY GSGPFNIRVG | 180 |
| GGSTDKQAYV FPQYVYDALR QVHEETGAQY IMSVNLEHGD YELSRAQLKM IKDNLPAEAV | 240 |
| LATEIGNEPN FYEGTQNNLT ALQYVRCCFV ADWQAMAKAL ACPCGTLDCC AYGQFAGPVW | 300 |
| GHVNVFPTTL KWFLDLNHKF TRMTTLHWYK ATKETYNTPA TLLEEAPIRK EMDNLRALVQ | 360 |
| TSQGYGIPLR VAESNTISNS GRVGVSNVFA ATLWTLDGSF EVAATGAVGI NFHQGSGQNL | 420 |
| YTSILRWYNN NQLSPPVLRP PFYGMVMFQQ AVGAGSKLLG KTQVSGDASN FKVWPLIDVN | 480 |
| TQELRFVLVN KHPNRAGTQV IRINRGWGYN APAVVTRLVA RGEDPLSATS GISLGGYYYA | 540 |
| VGGVLKGADA SELVPNEKDS SGLTSWKVYM PPGSAALVRV QLVNQ | 585 |
Predicted 3D structure by AlphaFold2 with pLDDT = 66.15 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MNTSGLFAAA KLANRPVSAC IIVLSALLIT TSAVADKLDG GSGLQTALTQ GVLKPQLAVA | 60 |
| SSTRLLPQQP VFDEEYTPGD NSAAFQGPDA PLPAVPAVPS PAAPAAPQEA TAPLYVTPPA | 120 |
| SFESLTEVNL DQPLLQIPQS FLGISHEWTH VEEINNIPGY KDSIRLLTSY GSGPFNIRVG | 180 |
| GGSTDKQAYV FPQYVYDALR QVHEETGAQY IMSVNLEHGD YELSRAQLKM IKDNLPAEAV | 240 |
| LATEIGNEPN FYEGTQNNLT ALQYVRCCFV ADWQAMAKAL ACPCGTLDCC AYGQFAGPVW | 300 |
| GHVNVFPTTL KWFLDLNHKF TRMTTLHWYK ATKETYNTPA TLLEEAPIRK EMDNLRALVQ | 360 |
| TSQGYGIPLR VAESNTISNS GRVGVSNVFA ATLWTLDGSF EVAATGAVGI NFHQGSGQNL | 420 |
| YTSILRWYNN NQLSPPVLRP PFYGMVMFQQ AVGAGSKLLG KTQVSGDASN FKVWPLIDVN | 480 |
| TQELRFVLVN KHPNRAGTQV IRINRGWGYN APAVVTRLVA RGEDPLSATS GISLGGYYYA | 540 |
| VGGVLKGADA SELVPNEKDS SGLTSWKVYM PPGSAALVRV QLVNQ | 585 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.