Information for CAZyme ID: WHT20080.1
Basic Information
| GenBank ID | WHT20080.1 |
| Family | CBM2, GH18 |
| Sequence Length | 599 |
| UniProt ID | WHT20080.1(MOD) |
| Average pLDDT? | 91.03 |
| CAZy50 ID | 52576 |
| CAZy50 Rep | Yes, WHT20080.1 |
| Structure Cluster | SC_CBM2_clus17, SC_GH18_clus16 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2981138 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Crossiella |
| Species | Crossiella sp. CA-258035 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MSHPRTRLLA MSSGLLLLSG LLTPPSASAA AQLSASFATT GTWDSGFGAQ YTIRNTGDAA | 60 |
| ASGWELVFDL PANVRVRSLW NGQHSVSGNR NTVRALSWNG VIGAGQSVTV GFNGSFTGAF | 120 |
| GGPVGCTING APCAGGPVDT QAPSVPGGLR VASSSASSLT LAWNAATDNV GVTGYRVYEG | 180 |
| SAVVATSTGA EAVISGLAPE STHTYAVTAV DAAGNESARS QAVTGSTQAD GSAPKSGIVG | 240 |
| AYYAGWTGFP VSRIPAQKLT HLYYAFGSVQ GGRCQAPSAA ALNHFAELRA LQQRHPYLNV | 300 |
| IISLGGWGAD GFSDGALTAA SRAAFVSSCV ELYLKQHKDV FDGIDIDWEF PVSGGIITKR | 360 |
| PEDKRNATLL FQEFRRQIDA TGTAQGRRLQ LIAATPVGRF QDDGPYDVAE SFELAEVASA | 420 |
| LDFYNVMTYD MGTGYSPISM FNAPMRAAAE DPTAEPMKGG NNVVGGIEHY LRHGVPKDKM | 480 |
| VLGTPFYSRG FTSSDPQADA KKGLFVPYTG TINAPQWKTI KAEYLNNPAW QQLRHATAQA | 540 |
| PYLYNAATNT FISYEDPASI AVKAAYAKQT GLRGTFMWEL SDDDAQHSLL NAMADPFLG | 599 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.03 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MSHPRTRLLA MSSGLLLLSG LLTPPSASAA AQLSASFATT GTWDSGFGAQ YTIRNTGDAA | 60 |
| ASGWELVFDL PANVRVRSLW NGQHSVSGNR NTVRALSWNG VIGAGQSVTV GFNGSFTGAF | 120 |
| GGPVGCTING APCAGGPVDT QAPSVPGGLR VASSSASSLT LAWNAATDNV GVTGYRVYEG | 180 |
| SAVVATSTGA EAVISGLAPE STHTYAVTAV DAAGNESARS QAVTGSTQAD GSAPKSGIVG | 240 |
| AYYAGWTGFP VSRIPAQKLT HLYYAFGSVQ GGRCQAPSAA ALNHFAELRA LQQRHPYLNV | 300 |
| IISLGGWGAD GFSDGALTAA SRAAFVSSCV ELYLKQHKDV FDGIDIDWEF PVSGGIITKR | 360 |
| PEDKRNATLL FQEFRRQIDA TGTAQGRRLQ LIAATPVGRF QDDGPYDVAE SFELAEVASA | 420 |
| LDFYNVMTYD MGTGYSPISM FNAPMRAAAE DPTAEPMKGG NNVVGGIEHY LRHGVPKDKM | 480 |
| VLGTPFYSRG FTSSDPQADA KKGLFVPYTG TINAPQWKTI KAEYLNNPAW QQLRHATAQA | 540 |
| PYLYNAATNT FISYEDPASI AVKAAYAKQT GLRGTFMWEL SDDDAQHSLL NAMADPFLG | 599 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.