Information for CAZyme ID: WHA08904.1
Basic Information
| GenBank ID | WHA08904.1 |
| Family | CBM5, GH18 |
| Sequence Length | 520 |
| UniProt ID | WHA08904.1(MOD) |
| Average pLDDT? | 88.58 |
| CAZy50 ID | 64895 |
| CAZy50 Rep | Yes, WHA08904.1 |
| Structure Cluster | SC_CBM5_clus12, SC_CBM5_clus3, SC_GH18_clus298 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 3031993 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Enterococcaceae |
| Genus | Enterococcus |
| Species | Enterococcus montenegrensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MSNDKKNKSR RLSLFRCLVV LVIIGGAVTL FLNGDKLVAT GTKKKEVKQQ TTAPWFASYV | 60 |
| DTTLTPQYAF EQYADNVVLS FVVAQKNGQK PSWGAAYSLD EASNDLDLDR RIARLRQKGS | 120 |
| EIIVSFGGLL NDELALAYQK PAELAKAYKS VIDRYELNTI DLDLENKGLT DKEAGKRRGE | 180 |
| ALAQLQAEQK KENKKLAIWL TLPATPKGLT KDGTDAVATL LTAGVDLAGV NIMTMNYGDS | 240 |
| RDKKLSMAEN SINALKQTHR QLKILYQEQD INLTNETLWT KLGATPMIGQ NDVLSEVFTL | 300 |
| QDARKLNTFA KKKNLGRVSM WSANRDRKSR ESNINTQVVS NHATGVKQEE GEFANLLKEG | 360 |
| LTGSIKADAK RETVSELSEE ELQKADDPAT SPYEIWQEAG VYLAGTKVVW KHNVYRAKWW | 420 |
| TKGEAPDSPV LQSSEIPWEL VGPVLPGEKP LPKVQLPADA YLQWNSEVVY HSGDRVMFEG | 480 |
| VGYEAKWWNQ GENPEKSGAN SDEAPWQALT QAEIKEFLKK | 520 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.58 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MSNDKKNKSR RLSLFRCLVV LVIIGGAVTL FLNGDKLVAT GTKKKEVKQQ TTAPWFASYV | 60 |
| DTTLTPQYAF EQYADNVVLS FVVAQKNGQK PSWGAAYSLD EASNDLDLDR RIARLRQKGS | 120 |
| EIIVSFGGLL NDELALAYQK PAELAKAYKS VIDRYELNTI DLDLENKGLT DKEAGKRRGE | 180 |
| ALAQLQAEQK KENKKLAIWL TLPATPKGLT KDGTDAVATL LTAGVDLAGV NIMTMNYGDS | 240 |
| RDKKLSMAEN SINALKQTHR QLKILYQEQD INLTNETLWT KLGATPMIGQ NDVLSEVFTL | 300 |
| QDARKLNTFA KKKNLGRVSM WSANRDRKSR ESNINTQVVS NHATGVKQEE GEFANLLKEG | 360 |
| LTGSIKADAK RETVSELSEE ELQKADDPAT SPYEIWQEAG VYLAGTKVVW KHNVYRAKWW | 420 |
| TKGEAPDSPV LQSSEIPWEL VGPVLPGEKP LPKVQLPADA YLQWNSEVVY HSGDRVMFEG | 480 |
| VGYEAKWWNQ GENPEKSGAN SDEAPWQALT QAEIKEFLKK | 520 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.