Information for CAZyme ID: WDE97741.1
Basic Information
| GenBank ID | WDE97741.1 |
| Family | GH2 |
| Sequence Length | 750 |
| UniProt ID | WDE97741.1(MOD) |
| Average pLDDT? | 93.95 |
| CAZy50 ID | 32823 |
| CAZy50 Rep | Yes, WDE97741.1 |
| Structure Cluster | SC_GH2_clus95 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1658616 |
| Kingdom | Bacteria |
| Phylum | Lentisphaerota |
| Class | Lentisphaeria |
| Order | Lentisphaerales |
| Family | Lentisphaeraceae |
| Genus | Lentisphaera |
| Species | Lentisphaera profundi |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKKVILIVIF ATTFVSNVIA EWKPVEGRIM TKWASEVDPK NPLPEYPRPQ LVRENWTNLN | 60 |
| GLWDYAITSK DAGQPDTFEG EILVPYPIES ALSGVKRKFT PNDRLWYSRS FNPPAVKGGE | 120 |
| RLMLNFGAID YKSEVFVNGT SVGKHTGGYD AFSYDITKQL KKGKNTLVVS VTDSTNGARG | 180 |
| KQQVIKFDQP GRIHYTANSG IWQTVWMEKV AETHISDLKI VPNIDNGTVS VTVNAKGGTA | 240 |
| SVTALDEGKK IATAKGKAGE TIILNIPSAK LWSPDSPFLY DLKISLGKDT VTSYFGMRKI | 300 |
| SIEKDEKGKM RPKLNNEFIF MTGPLDQGYW PDGNLTAPTD EALKFDLEMT KKYGFNSTRK | 360 |
| HVKIEPARWF YWTDKLGLLV WQDMPNGGAG TGAKGNKDGV PKSKEQADQF EKELRLMVDQ | 420 |
| HSNYPSVIMW VIFNESWGQY DTPRLTKMVK DMDPTRLVCG GSGWYIPPAC GDVFDRHVYK | 480 |
| RAPSVAPDAT RIGVGGEFGG FGYVAVGNLW VADQRESSVY GTAVDKRHFE KMYLEAWEET | 540 |
| FANDLRVGMS GAIYTQLTDV ETEINGLMSY DRKVMKIDPE LARKAIEDRN FPKKASARML | 600 |
| VPTSEKEPQE YYYTMTKPSD DWFKPNADRS SWSKGPGVIG NKVHRNPTIN IGTEWKSSDL | 660 |
| WVARNFDLSE FPLKRPVIRV AYDENATIYI NGVKALSLKK GDNTRHLNIP MPAEAAAALK | 720 |
| KTGNVIAIHV DNKNKSQYID VGIGEESITW | 750 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.95 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MKKVILIVIF ATTFVSNVIA EWKPVEGRIM TKWASEVDPK NPLPEYPRPQ LVRENWTNLN | 60 |
| GLWDYAITSK DAGQPDTFEG EILVPYPIES ALSGVKRKFT PNDRLWYSRS FNPPAVKGGE | 120 |
| RLMLNFGAID YKSEVFVNGT SVGKHTGGYD AFSYDITKQL KKGKNTLVVS VTDSTNGARG | 180 |
| KQQVIKFDQP GRIHYTANSG IWQTVWMEKV AETHISDLKI VPNIDNGTVS VTVNAKGGTA | 240 |
| SVTALDEGKK IATAKGKAGE TIILNIPSAK LWSPDSPFLY DLKISLGKDT VTSYFGMRKI | 300 |
| SIEKDEKGKM RPKLNNEFIF MTGPLDQGYW PDGNLTAPTD EALKFDLEMT KKYGFNSTRK | 360 |
| HVKIEPARWF YWTDKLGLLV WQDMPNGGAG TGAKGNKDGV PKSKEQADQF EKELRLMVDQ | 420 |
| HSNYPSVIMW VIFNESWGQY DTPRLTKMVK DMDPTRLVCG GSGWYIPPAC GDVFDRHVYK | 480 |
| RAPSVAPDAT RIGVGGEFGG FGYVAVGNLW VADQRESSVY GTAVDKRHFE KMYLEAWEET | 540 |
| FANDLRVGMS GAIYTQLTDV ETEINGLMSY DRKVMKIDPE LARKAIEDRN FPKKASARML | 600 |
| VPTSEKEPQE YYYTMTKPSD DWFKPNADRS SWSKGPGVIG NKVHRNPTIN IGTEWKSSDL | 660 |
| WVARNFDLSE FPLKRPVIRV AYDENATIYI NGVKALSLKK GDNTRHLNIP MPAEAAAALK | 720 |
| KTGNVIAIHV DNKNKSQYID VGIGEESITW | 750 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.