Information for CAZyme ID: WBV52021.1
Basic Information
GenBank ID | WBV52021.1 |
Family | GH17 |
Sequence Length | 793 |
UniProt ID | A0A3C1RID2(97.1,99.2)![]() |
Average pLDDT? | 88.45 |
CAZy50 ID | 28131 |
CAZy50 Rep | Yes, WBV52021.1 |
Structure Cluster | SC_GH17_clus104 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 373672 |
Kingdom | Bacteria |
Phylum | Bacteroidota |
Class | Flavobacteriia |
Order | Flavobacteriales |
Family | Weeksellaceae |
Genus | Chryseobacterium |
Species | Chryseobacterium gambrini |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MADQIKKSAN KVPIGQKVAF GLGMLANQMF PAMIGIFTVV LVEKLGFSGF LLGLTYFIPK | 60 |
FYDALFDLIM GYVSDNTKSK WGRRRQYVLA GAIILGISFA LMWQLYAENG VTYNFWYFLV | 120 |
VSLIFYSGLT IFSIPYVAMG YEMSDDFHER TNIMATSQLI GQLAWVVAPW FWVIMADQSL | 180 |
FPSSDVAVRT LAVYVAIGCA ILAAIPAFFI PSKSTLHENY SPIDLKGILG SFGEIKEGLK | 240 |
ASVEIKPFRK ICIATFLIFN AFQTTAGFSY FIIKYYLFKG NEEGFGLWPT LFGSVGAIIT | 300 |
TVAVIPIVAR MSKVMGKKKA FLVSQGISIV GYILLYLLFV PGKPYLFLFA LPFFSFGIGS | 360 |
LFTLMMSMTS DVIDIDELNT GKRREGSLGA IYWWMVKFGT AVAGLLSGMI LSLVAFQSNA | 420 |
ATQTDETMFW LRIFFVGIPI LGTLTAIWTM KNYDVDEAKA REVRDLLEKR KAPKPSGYGA | 480 |
NNVLEGMNLA GLSRLQLQQQ FPQYYFPTYD YSNVERVKSE FLNVFNGGMS CICFSVFTEK | 540 |
QFPGDFITEE QIRKRLEVLK PHTQWIRVFS STHGHENIPK IAKEMGFKVL MGAWIGKDEA | 600 |
ENQQEIQSLI QLIKEGNVDI AAVGNEVLFR GDQNEETLLG YIGQVKNQTL NVPITYIDVY | 660 |
YEIINHPKLV VASDTILINC YPFWEGASID HAGMYLQEMY HQTQKIAGGK EIIIAETGWP | 720 |
SKGEAVQNAE PSPENLMRYY IEAQKWASKE QINLFYFSSF DESWKIHYEG WAGTSWGLWG | 780 |
ANEKFKFKKK IQD | 793 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.45 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MADQIKKSAN KVPIGQKVAF GLGMLANQMF PAMIGIFTVV LVEKLGFSGF LLGLTYFIPK | 60 |
FYDALFDLIM GYVSDNTKSK WGRRRQYVLA GAIILGISFA LMWQLYAENG VTYNFWYFLV | 120 |
VSLIFYSGLT IFSIPYVAMG YEMSDDFHER TNIMATSQLI GQLAWVVAPW FWVIMADQSL | 180 |
FPSSDVAVRT LAVYVAIGCA ILAAIPAFFI PSKSTLHENY SPIDLKGILG SFGEIKEGLK | 240 |
ASVEIKPFRK ICIATFLIFN AFQTTAGFSY FIIKYYLFKG NEEGFGLWPT LFGSVGAIIT | 300 |
TVAVIPIVAR MSKVMGKKKA FLVSQGISIV GYILLYLLFV PGKPYLFLFA LPFFSFGIGS | 360 |
LFTLMMSMTS DVIDIDELNT GKRREGSLGA IYWWMVKFGT AVAGLLSGMI LSLVAFQSNA | 420 |
ATQTDETMFW LRIFFVGIPI LGTLTAIWTM KNYDVDEAKA REVRDLLEKR KAPKPSGYGA | 480 |
NNVLEGMNLA GLSRLQLQQQ FPQYYFPTYD YSNVERVKSE FLNVFNGGMS CICFSVFTEK | 540 |
QFPGDFITEE QIRKRLEVLK PHTQWIRVFS STHGHENIPK IAKEMGFKVL MGAWIGKDEA | 600 |
ENQQEIQSLI QLIKEGNVDI AAVGNEVLFR GDQNEETLLG YIGQVKNQTL NVPITYIDVY | 660 |
YEIINHPKLV VASDTILINC YPFWEGASID HAGMYLQEMY HQTQKIAGGK EIIIAETGWP | 720 |
SKGEAVQNAE PSPENLMRYY IEAQKWASKE QINLFYFSSF DESWKIHYEG WAGTSWGLWG | 780 |
ANEKFKFKKK IQD | 793 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.