CAZyme3D

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Entry ID

Information for CAZyme ID: WAO97403.1

Basic Information

GenBank IDWAO97403.1
FamilyCBM18, CBM50
Sequence Length175
UniProt IDWAO97403.1(MOD)Download
Average pLDDT?91.40
CAZy50 ID182287
CAZy50 RepYes, WAO97403.1
Structure ClusterSC_CBM18_clus152, SC_CBM50_clus719
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID195108
KingdomEukaryota
PhylumAscomycota
ClassSordariomycetes
OrderHypocreales
FamilyNectriaceae
GenusFusarium
SpeciesFusarium falciforme

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MATPSVPRKR  QLAAGDINCR  DWGETYEHVG  ESTCQKLADR  YGITLGTFYE  LNPILESDCK60
KVRPYTQYCH  RGFIEPLRAH  GGKCGPLYNN  ATCLGTDKEC  CNSETWTCGD  RERDCTPSLC120
YRGAGTCFLR  AVVSTDGICG  LVKNRYTLRV  CGEWGNCCNL  QGKCGSGPDF  CGKGC175

Predicted 3D structure by AlphaFold2 with pLDDT = 91.40 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MATPSVPRKR  QLAAGDINCR  DWGETYEHVG  ESTCQKLADR  YGITLGTFYE  LNPILESDCK60
KVRPYTQYCH  RGFIEPLRAH  GGKCGPLYNN  ATCLGTDKEC  CNSETWTCGD  RERDCTPSLC120
YRGAGTCFLR  AVVSTDGICG  LVKNRYTLRV  CGEWGNCCNL  QGKCGSGPDF  CGKGC175

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) :

MATPSVPRKR  QLAAGDINCR  DWGETYEHVG  ESTCQKLADR  YGITLGTFYE  LNPILESDCK60
KVRPYTQYCH  RGFIEPLRAH  GGKCGPLYNN  ATCLGTDKEC  CNSETWTCGD  RERDCTPSLC120
YRGAGTCFLR  AVVSTDGICG  LVKNRYTLRV  CGEWGNCCNL  QGKCGSGPDF  CGKGC175

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help