CAZyme3D

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Entry ID

Information for CAZyme ID: WAO85306.1

Basic Information

GenBank IDWAO85306.1
FamilyGT31
Sequence Length524
UniProt IDA0A9P9L7F3(97.7,100)Download
Average pLDDT?85.93
CAZy50 ID64092
CAZy50 RepYes, WAO85306.1
Structure ClusterSC_GT31_clus176
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID195108
KingdomEukaryota
PhylumAscomycota
ClassSordariomycetes
OrderHypocreales
FamilyNectriaceae
GenusFusarium
SpeciesFusarium falciforme

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MVMLSSSPSL  PPRVVQLVLL  VVFGLLFIHT  RWLSQSRGDT  ISHNHREIAI  SGPVPEEQYL60
DRLTRQIGLS  NYTSWTAWKI  RISEQDSEWT  SLTNIDADFH  SNQPRVVDVR  EPVRRDLVAN120
QELTIPVPGG  PRPGQVDASD  FLFAVSTSFE  RVARDDYAVV  KDWARWMTGG  NQHGNGASFV180
LMLDQADSLQ  VKELNNVLHT  FGIDAYVTTS  TNPMSAARRY  FSMIETIKGF  GAKLTQNGQR240
KKWYGILDEE  IFLPNLSYLQ  ERLFAFNSDK  ELYIGLPSER  GDWAIGEGFM  TTYGGGAVFL300
TRPAISRIPQ  LPCFGDSADN  PTDKKRWDGV  LQECLTQHTR  MRMHILPSFY  SPSHNDEYTA360
HIDSYETGVQ  PLALHDYEER  HHLTPSLAHL  VTDVCGEACF  LQRYRFRDNW  VLVNGYTITE420
YPDGMNLADM  PLSMVGRSAE  ARRKSVIGPV  KLDEDPTDRK  MLFWTGRRNV  WKLMDSAMTK480
EGDVWQAYVK  RGAVEDATSR  KRSVEDVTDS  VIVLIWESAA  SAAS524

Predicted 3D structure by AlphaFold2 with pLDDT = 85.93 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MVMLSSSPSL  PPRVVQLVLL  VVFGLLFIHT  RWLSQSRGDT  ISHNHREIAI  SGPVPEEQYL60
DRLTRQIGLS  NYTSWTAWKI  RISEQDSEWT  SLTNIDADFH  SNQPRVVDVR  EPVRRDLVAN120
QELTIPVPGG  PRPGQVDASD  FLFAVSTSFE  RVARDDYAVV  KDWARWMTGG  NQHGNGASFV180
LMLDQADSLQ  VKELNNVLHT  FGIDAYVTTS  TNPMSAARRY  FSMIETIKGF  GAKLTQNGQR240
KKWYGILDEE  IFLPNLSYLQ  ERLFAFNSDK  ELYIGLPSER  GDWAIGEGFM  TTYGGGAVFL300
TRPAISRIPQ  LPCFGDSADN  PTDKKRWDGV  LQECLTQHTR  MRMHILPSFY  SPSHNDEYTA360
HIDSYETGVQ  PLALHDYEER  HHLTPSLAHL  VTDVCGEACF  LQRYRFRDNW  VLVNGYTITE420
YPDGMNLADM  PLSMVGRSAE  ARRKSVIGPV  KLDEDPTDRK  MLFWTGRRNV  WKLMDSAMTK480
EGDVWQAYVK  RGAVEDATSR  KRSVEDVTDS  VIVLIWESAA  SAAS524

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) :

MIMLSSSPSL  PPRVVQLVLL  VVFGLLFIHT  RWLSQSREDR  ISLAHREIAI  NGPVPEEQYL60
DRLTRQIGLS  NYTSWTAWKI  RISEQDSEWT  SLTNIDADFH  SNQPRVVDVR  EPVRRDLVAN120
QELTIPVPGG  PRPGQVDASD  FLFAVSTSFE  RVARDDYAVV  KDWARWMTGG  NQHGNGASFV180
LMLDQADSLQ  VKELNNVLHT  FGIDAHVTTS  TNPMSAARRY  FSMIEAIKGF  GAKLTQNGQR240
KKWYGILDEE  IFLPNLSYLQ  ERLFAFNSDK  ELYIGLPSER  GDWAIGEGFM  TTYGGGAVFL300
TRSAISRIPQ  LPCFGDSADN  PTDKKRWDGV  LQECLTQHTR  MRMHILPSFY  SPSHNDEYTA360
HIDSYETGIQ  PLALHDYEER  HHLTPSLAHL  VTDVCGEACF  LQRYRFRDNW  VLVNGYTITE420
YPDGMNLADM  PLSMVGRSAE  ARRKSVIGPV  KLNEDPTDRK  MLFWTGRRNV  WKLMDSATTK480
EGDVWQAYVK  RGAVEDATSR  KRSVEDVTDS  VIVLIWESAA  SAAS524

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help