Information for CAZyme ID: WAL81309.1
Basic Information
| GenBank ID | WAL81309.1 |
| Family | GH73 |
| Sequence Length | 889 |
| UniProt ID | A0A9E9DAN7(100,100) |
| Average pLDDT? | 71.31 |
| CAZy50 ID | 20140 |
| CAZy50 Rep | Yes, WAL81309.1 |
| Structure Cluster | SC_GH73_clus142 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 3002643 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Pandoraea |
| Species | Pandoraea sp. XJJ-1 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MPTQVQSFVS QYAPLAAQVG QQIGVTPDVV LGHWGEETGW GKSIIPGTNN LGNIKGQGIG | 60 |
| ATDNMTGATD QYQAFDSPDA FGSGFASLIA KHYPGAVGTG SDAQAYATAL QKGGYAQDPN | 120 |
| YASKLTGAVA TVRKLGDVLA SAISGSVRAN ELTSAQHGQP GASNDPFSAA FLGTQAVSQP | 180 |
| PAATQASSPP QPTSAPGNDP FSAAFGPASS APSPEKVIAP PPSPVASITA GQRISQGLLD | 240 |
| PMNAGAQLLT HTLPGAVVNA VNHGTQWVNN QPVIGPITKA LGMVPATSQQ IDASISNQEE | 300 |
| QYQAARKAAG QDGVDWLRLG GNVVSPVTIG AAMLSPAAGA TAGIGGLAAA GAGAGVVGGA | 360 |
| LQPVTQDADT RFSGQKLGQM LVGAGTGAVA TPIMSKVIAP LISKVAGYVS NAVGGSSGGM | 420 |
| AGMQAAAQTD QMISQALKET GQTIADVPAS QLANLRATVT NALKNGQQLD PAALMRNADF | 480 |
| EAVGIPPTLG QITRDPAQFA AERNLRGIEG VGDPLLQRFN SQNQALQKGI SNFGGNQALE | 540 |
| SYPAGKMLSG SLADADETMR KGVTAAYQTA RASSGVNDTV PLSGIAQDYA TILNNYAEKV | 600 |
| PGGVRNAFEQ YGLLGGAQRK VFGIGDAENL LKVINANRSN DPATNSALGE LSTSVKNAIL | 660 |
| QADDQGGVFA APRALAAQRF ALHDAVPALN AAAQGTVAPD DFVQRFIING NTEEVQGLAK | 720 |
| LLDPQSFQQA RAQIGAKLQN AAFGQNAAGD KIFTPERYSK ALSDLGTDKL GAFFGPQEIA | 780 |
| QMHAFGRVGA YINSTPSAAA VNTSNTSSAI LSALGKGALG LFHVVPGGSL ATGAITKGMQ | 840 |
| GATNARAVGE ALAAQVPQTA TPMNPAQAAL LGRLLSGGGL AAGIAAAPR | 889 |
Predicted 3D structure by AlphaFold2 with pLDDT = 71.31 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MPTQVQSFVS QYAPLAAQVG QQIGVTPDVV LGHWGEETGW GKSIIPGTNN LGNIKGQGIG | 60 |
| ATDNMTGATD QYQAFDSPDA FGSGFASLIA KHYPGAVGTG SDAQAYATAL QKGGYAQDPN | 120 |
| YASKLTGAVA TVRKLGDVLA SAISGSVRAN ELTSAQHGQP GASNDPFSAA FLGTQAVSQP | 180 |
| PAATQASSPP QPTSAPGNDP FSAAFGPASS APSPEKVIAP PPSPVASITA GQRISQGLLD | 240 |
| PMNAGAQLLT HTLPGAVVNA VNHGTQWVNN QPVIGPITKA LGMVPATSQQ IDASISNQEE | 300 |
| QYQAARKAAG QDGVDWLRLG GNVVSPVTIG AAMLSPAAGA TAGIGGLAAA GAGAGVVGGA | 360 |
| LQPVTQDADT RFSGQKLGQM LVGAGTGAVA TPIMSKVIAP LISKVAGYVS NAVGGSSGGM | 420 |
| AGMQAAAQTD QMISQALKET GQTIADVPAS QLANLRATVT NALKNGQQLD PAALMRNADF | 480 |
| EAVGIPPTLG QITRDPAQFA AERNLRGIEG VGDPLLQRFN SQNQALQKGI SNFGGNQALE | 540 |
| SYPAGKMLSG SLADADETMR KGVTAAYQTA RASSGVNDTV PLSGIAQDYA TILNNYAEKV | 600 |
| PGGVRNAFEQ YGLLGGAQRK VFGIGDAENL LKVINANRSN DPATNSALGE LSTSVKNAIL | 660 |
| QADDQGGVFA APRALAAQRF ALHDAVPALN AAAQGTVAPD DFVQRFIING NTEEVQGLAK | 720 |
| LLDPQSFQQA RAQIGAKLQN AAFGQNAAGD KIFTPERYSK ALSDLGTDKL GAFFGPQEIA | 780 |
| QMHAFGRVGA YINSTPSAAA VNTSNTSSAI LSALGKGALG LFHVVPGGSL ATGAITKGMQ | 840 |
| GATNARAVGE ALAAQVPQTA TPMNPAQAAL LGRLLSGGGL AAGIAAAPR | 889 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.