Information for CAZyme ID: WAJ72117.1
Basic Information
GenBank ID | WAJ72117.1 |
Family | PL6_3 |
Sequence Length | 771 |
UniProt ID | A0A9E9BTP3(100,100)![]() |
Average pLDDT? | 88.98 |
CAZy50 ID | 30456 |
CAZy50 Rep | Yes, WAJ72117.1 |
Structure Cluster | SC_PL6_clus18 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2984846 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Gammaproteobacteria |
Order | Alteromonadales |
Family | Alteromonadaceae |
Genus | Catenovulum |
Species | Catenovulum sp. TS8 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MNKKLIAISV AALLTTGCDG VYDNFGPADS RGTIEINGQS EVGQALMVTV ADDDGLSNAV | 60 |
TYTWMADSTV IEGATESTYT VTAAEVGTAI SVRAEYVDDS GNDESLIIKA PAIVPEMTAD | 120 |
GVVMISGIPD DGVIAFGSEL TANVSDTDGI DSTINYQWWA DDNEISGATA QSYTTTMADV | 180 |
GKQISVQTTY TDNLGLVEMP VSDKTNAIVD PTAFSLTMSQ TDDITVGTEL VATFGGVDAT | 240 |
AAFQWYADDT EISGATAQIY TVTAEDLEKT LSVTVTYNSG NKTLTQQAND VVYSTVVTSG | 300 |
AELVTAVANA AENDVIALAS GEYVDVGYDA NYAGDLTTYG VLVSTNGVKL TRTKNSDAVI | 360 |
KGRTCIALKG DNTMVDGLVF EENNALVPDA GSNETACESS SSTDAMLLLN GDGVIVRNSI | 420 |
FKDHVGGTGF DWIELRGTNS IVERNLFSGS DSANDKSGPI SIYINTDVDQ DQGNVVQYNH | 480 |
FTNITPSSSA NSGAYAIQVG RSTGDDSKGV GQHTIQYNLF DGVEVKERLI KVQGGENTIK | 540 |
GNTIINSVGM ISLEDGVFNT VSDNIIIPGE GVKSGGIALS ALGHTVTNNY IAEDAYTGGD | 600 |
RGGIFIHDDM LDNSGNEAAI ATYTGAELAV TISNNTLVNV AQAVGFDDRD ASCVGFPPYL | 660 |
NTSSNLIAST ADTSLSKMVG TESADFSGLG CSLNSNSTKT DNHVFVSDIT DGGTVDISTM | 720 |
VGNAGEAGLT TNAQGLYNGS GAQANIGADA SQLYVISADD VGPGSSWTAN E | 771 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.98 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MNKKLIAISV AALLTTGCDG VYDNFGPADS RGTIEINGQS EVGQALMVTV ADDDGLSNAV | 60 |
TYTWMADSTV IEGATESTYT VTAAEVGTAI SVRAEYVDDS GNDESLIIKA PAIVPEMTAD | 120 |
GVVMISGIPD DGVIAFGSEL TANVSDTDGI DSTINYQWWA DDNEISGATA QSYTTTMADV | 180 |
GKQISVQTTY TDNLGLVEMP VSDKTNAIVD PTAFSLTMSQ TDDITVGTEL VATFGGVDAT | 240 |
AAFQWYADDT EISGATAQIY TVTAEDLEKT LSVTVTYNSG NKTLTQQAND VVYSTVVTSG | 300 |
AELVTAVANA AENDVIALAS GEYVDVGYDA NYAGDLTTYG VLVSTNGVKL TRTKNSDAVI | 360 |
KGRTCIALKG DNTMVDGLVF EENNALVPDA GSNETACESS SSTDAMLLLN GDGVIVRNSI | 420 |
FKDHVGGTGF DWIELRGTNS IVERNLFSGS DSANDKSGPI SIYINTDVDQ DQGNVVQYNH | 480 |
FTNITPSSSA NSGAYAIQVG RSTGDDSKGV GQHTIQYNLF DGVEVKERLI KVQGGENTIK | 540 |
GNTIINSVGM ISLEDGVFNT VSDNIIIPGE GVKSGGIALS ALGHTVTNNY IAEDAYTGGD | 600 |
RGGIFIHDDM LDNSGNEAAI ATYTGAELAV TISNNTLVNV AQAVGFDDRD ASCVGFPPYL | 660 |
NTSSNLIAST ADTSLSKMVG TESADFSGLG CSLNSNSTKT DNHVFVSDIT DGGTVDISTM | 720 |
VGNAGEAGLT TNAQGLYNGS GAQANIGADA SQLYVISADD VGPGSSWTAN E | 771 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.