Information for CAZyme ID: WAH97328.1
Basic Information
| GenBank ID | WAH97328.1 |
| Family | GH78 |
| Sequence Length | 887 |
| UniProt ID | A0A9E9ASZ4(100,100) |
| Average pLDDT? | 93.10 |
| CAZy50 ID | 20265 |
| CAZy50 Rep | Yes, WAH97328.1 |
| Structure Cluster | SC_GH78_clus25 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2996261 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Micrococcaceae |
| Genus | Arthrobacter |
| Species | Arthrobacter sp. MMS18-M83 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MTTIPAPTAL TTNRRVNPIG IDSTIPEFGW QSESGQAQSG YEIEVFADNG TAVWLSGFIA | 60 |
| GTEPFGVAYR GESLVSRQRY IWRVRVTLEG GEQSVWSRSA TFETGILDAS EWSALWVTDS | 120 |
| DPEPQKTLRS LYFRAETELR GDVRRARAYA SALGWYKLFI NGTDVTGDAL VPRFTPFDDY | 180 |
| VEYQAYDVTD LLKSGSNILA AAVGDGRFRG RNGYKSTGVI YGDRLALIVQ IHVEFTDGTE | 240 |
| AVLSTDRNWV VGGGPILTAD PKTGERVDLR ISTTDWLQPG GAPINATPVR QLPAHRRVLV | 300 |
| AEELERVTLV STRRGTISRT PSGVQIVDFG QNFSGIARIR LKGYSGQSVR LSYGEVLTPQ | 360 |
| GEFDEHYLDF PTKTKEWFQR DEVTLPAGSV DYTPWFTFKG FRYLAVQPAE GDVVIEDVQG | 420 |
| LVYTSDIAAA AQFETSDPRL NQLWSNIEWS LRSNFLDVPM DCPTRERSGY TGDLQVFGKT | 480 |
| AAVMVDSDNY IRRFLRNLEA DQYEDGGVPA YAPREWSDFR REREPLRNWG PVTGWGDATT | 540 |
| ILPMVLHEYY GDIEVLRRQY ASARAWVEYL REFAATKKGL VRRFGHRFGV HEKYIVDHGR | 600 |
| QVGEWLRPGT NIITESIATM IRPPAEVATA YLAYSAKLLS AMAELIGNGP DVKRFEAIAT | 660 |
| EVRAAYRAAF VRSSGRRIGA DMQDDYVRAL AFDLLAPHER AGALGRLVEL VQKADYHLGT | 720 |
| GFLSTPMLLP VLCDNGRPDI AYRLLMQTTV PSWLAEVDMG ATTVWETWEG YKKNGNAFMS | 780 |
| HNHYAFGSVA SWLVEYVLGI RPLEAGYRRI LFAPTPGGGL ARAAGSVTTP YGQASSNWSI | 840 |
| DDGVVSLNVT VPNGTSAEVR LGDGTAHEVG AGDHQFTWPV NAVLTRV | 887 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.10 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MTTIPAPTAL TTNRRVNPIG IDSTIPEFGW QSESGQAQSG YEIEVFADNG TAVWLSGFIA | 60 |
| GTEPFGVAYR GESLVSRQRY IWRVRVTLEG GEQSVWSRSA TFETGILDAS EWSALWVTDS | 120 |
| DPEPQKTLRS LYFRAETELR GDVRRARAYA SALGWYKLFI NGTDVTGDAL VPRFTPFDDY | 180 |
| VEYQAYDVTD LLKSGSNILA AAVGDGRFRG RNGYKSTGVI YGDRLALIVQ IHVEFTDGTE | 240 |
| AVLSTDRNWV VGGGPILTAD PKTGERVDLR ISTTDWLQPG GAPINATPVR QLPAHRRVLV | 300 |
| AEELERVTLV STRRGTISRT PSGVQIVDFG QNFSGIARIR LKGYSGQSVR LSYGEVLTPQ | 360 |
| GEFDEHYLDF PTKTKEWFQR DEVTLPAGSV DYTPWFTFKG FRYLAVQPAE GDVVIEDVQG | 420 |
| LVYTSDIAAA AQFETSDPRL NQLWSNIEWS LRSNFLDVPM DCPTRERSGY TGDLQVFGKT | 480 |
| AAVMVDSDNY IRRFLRNLEA DQYEDGGVPA YAPREWSDFR REREPLRNWG PVTGWGDATT | 540 |
| ILPMVLHEYY GDIEVLRRQY ASARAWVEYL REFAATKKGL VRRFGHRFGV HEKYIVDHGR | 600 |
| QVGEWLRPGT NIITESIATM IRPPAEVATA YLAYSAKLLS AMAELIGNGP DVKRFEAIAT | 660 |
| EVRAAYRAAF VRSSGRRIGA DMQDDYVRAL AFDLLAPHER AGALGRLVEL VQKADYHLGT | 720 |
| GFLSTPMLLP VLCDNGRPDI AYRLLMQTTV PSWLAEVDMG ATTVWETWEG YKKNGNAFMS | 780 |
| HNHYAFGSVA SWLVEYVLGI RPLEAGYRRI LFAPTPGGGL ARAAGSVTTP YGQASSNWSI | 840 |
| DDGVVSLNVT VPNGTSAEVR LGDGTAHEVG AGDHQFTWPV NAVLTRV | 887 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.