Information for CAZyme ID: WAC28118.1
Basic Information
| GenBank ID | WAC28118.1 |
| Family | GT2, GT4 |
| Sequence Length | 1175 |
| UniProt ID | A0A9E8P6P6(100,100) |
| Average pLDDT? | 89.64 |
| CAZy50 ID | 8399 |
| CAZy50 Rep | Yes, WAC28118.1 |
| Structure Cluster | SC_GT2_clus1268, SC_GT4_clus619 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2995166 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Ancylobacter |
| Species | Ancylobacter sp. SL191 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKYKFEFMKQ LFEASAFFDK NWYLDNYPDV AEAGANPVEH YIQHGAREGR NPGPHFDTRT | 60 |
| YLDCRPDVAA AGLNPLLHFL QYGIIEVAAL PPAAIVVELE RRGISFGDEL PQANAVSAPV | 120 |
| AGPAVHYAAK TGPIAVFVSH DASLTGAPAV LEVIARWFQN HTDYDVRIIC LEDGPRFEAF | 180 |
| RQIAPVLRLD KSDWDEDTTD NKRAKVREFV GAAPAFTFIN SIASGKYCQI DPYDSPRLAF | 240 |
| VHELEKVADR FPLEELLLRE RVDHVLCDGE PVAEFLRARG FADDRLSVRS CFIDHNGLTA | 300 |
| PLRASEKARL KASMGWPSDA KIVMGCGTVH WRKQPQTFVR MATAITGDVR FIWIGDGEDL | 360 |
| EAIRELIKMA GVADRVEFIG TRSDFRELLQ LADVFALTSS EDPFPLVCLE AALAFVPSVI | 420 |
| FREAGGIHAM VVPEGLPPAG RAVTLGDEAA FFAAVQALLD DDAVRQSCGH VARERVEALY | 480 |
| TTDRACMEIL LTLRRVAGIP PRVSVLVPTY NSAKYLEPRL SSIANQTFKD VEIVLRDDAS | 540 |
| KDETVPMLEA FAREHPLARV LRAETNSGSV FRAWSEVIKT ATGDLLWIAE ADDVCEPDFL | 600 |
| AKIVPTFAAS GIRLAHGRSI PMNAQGEIVG DYATAYLDSI APGRWKASFD IPARLEVNAA | 660 |
| LGRGNCIPNA SGVVVRRGSA RRAAAVAVDF RLAGDWAFYL AAIHGGRIAY VHEAVNYHRR | 720 |
| HDETVTHRIE GTHLYFQELA DTNALTRHLY GPDEARDAAF AQRLAGEAAR FGWSEPLPAG | 780 |
| RVPESAARPR PPGVLYGVGD LSGGGAQMFA ARFVSGWLEK GSPAVLFTTG HQPAHEAVLS | 840 |
| AIAPDVPVLS AAEIEARGLP AIMRDYNLER VVTGHWWADR WMARTMDALA DSERPPWTVI | 900 |
| MHGCHENVLD NLEEFDDHQE VFTAAERHVA LWVWTAAKNK RVFSQGYVTP RATVNITNGF | 960 |
| TAVSTRPLAR QSLGIPDDAV VFTLASRAIA SKGWLVAMEA FAWLRQHVPN SDRAHLLLIG | 1020 |
| DGPVASEIDA MPLPDGVHRV AHTSRLADYI ALSDVGLLPS WFPGESMPLV LIEFLAQGKP | 1080 |
| VIASDIGNCP WVLSSGEGKQ IAGIVVERNA EGVVTAESLA AAMRLFLDDE LASRQMARAA | 1140 |
| TEAFAKFSFD AMIDSYVGAI DAAVMSGRSM RAELG | 1175 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.64 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MKYKFEFMKQ LFEASAFFDK NWYLDNYPDV AEAGANPVEH YIQHGAREGR NPGPHFDTRT | 60 |
| YLDCRPDVAA AGLNPLLHFL QYGIIEVAAL PPAAIVVELE RRGISFGDEL PQANAVSAPV | 120 |
| AGPAVHYAAK TGPIAVFVSH DASLTGAPAV LEVIARWFQN HTDYDVRIIC LEDGPRFEAF | 180 |
| RQIAPVLRLD KSDWDEDTTD NKRAKVREFV GAAPAFTFIN SIASGKYCQI DPYDSPRLAF | 240 |
| VHELEKVADR FPLEELLLRE RVDHVLCDGE PVAEFLRARG FADDRLSVRS CFIDHNGLTA | 300 |
| PLRASEKARL KASMGWPSDA KIVMGCGTVH WRKQPQTFVR MATAITGDVR FIWIGDGEDL | 360 |
| EAIRELIKMA GVADRVEFIG TRSDFRELLQ LADVFALTSS EDPFPLVCLE AALAFVPSVI | 420 |
| FREAGGIHAM VVPEGLPPAG RAVTLGDEAA FFAAVQALLD DDAVRQSCGH VARERVEALY | 480 |
| TTDRACMEIL LTLRRVAGIP PRVSVLVPTY NSAKYLEPRL SSIANQTFKD VEIVLRDDAS | 540 |
| KDETVPMLEA FAREHPLARV LRAETNSGSV FRAWSEVIKT ATGDLLWIAE ADDVCEPDFL | 600 |
| AKIVPTFAAS GIRLAHGRSI PMNAQGEIVG DYATAYLDSI APGRWKASFD IPARLEVNAA | 660 |
| LGRGNCIPNA SGVVVRRGSA RRAAAVAVDF RLAGDWAFYL AAIHGGRIAY VHEAVNYHRR | 720 |
| HDETVTHRIE GTHLYFQELA DTNALTRHLY GPDEARDAAF AQRLAGEAAR FGWSEPLPAG | 780 |
| RVPESAARPR PPGVLYGVGD LSGGGAQMFA ARFVSGWLEK GSPAVLFTTG HQPAHEAVLS | 840 |
| AIAPDVPVLS AAEIEARGLP AIMRDYNLER VVTGHWWADR WMARTMDALA DSERPPWTVI | 900 |
| MHGCHENVLD NLEEFDDHQE VFTAAERHVA LWVWTAAKNK RVFSQGYVTP RATVNITNGF | 960 |
| TAVSTRPLAR QSLGIPDDAV VFTLASRAIA SKGWLVAMEA FAWLRQHVPN SDRAHLLLIG | 1020 |
| DGPVASEIDA MPLPDGVHRV AHTSRLADYI ALSDVGLLPS WFPGESMPLV LIEFLAQGKP | 1080 |
| VIASDIGNCP WVLSSGEGKQ IAGIVVERNA EGVVTAESLA AAMRLFLDDE LASRQMARAA | 1140 |
| TEAFAKFSFD AMIDSYVGAI DAAVMSGRSM RAELG | 1175 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.