Information for CAZyme ID: WAC18549.1
Basic Information
| GenBank ID | WAC18549.1 |
| Family | CBM16, GH51_6 |
| Sequence Length | 860 |
| UniProt ID | A0A9E8NRG8(100,100) |
| Average pLDDT? | 89.54 |
| CAZy50 ID | 22199 |
| CAZy50 Rep | Yes, WAC18549.1 |
| Structure Cluster | SC_CBM16_clus2, SC_GH51_clus46 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2995170 |
| Kingdom | Bacteria |
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiae |
| Order | Verrucomicrobiales |
| Family | Verrucomicrobiaceae |
| Genus | Luteolibacter |
| Species | Luteolibacter sp. SL250 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKALSLAALL PLVLPLPSVA VEYVAINATN VLADSSRKPI GINMDYLMDS DRRRPDAPRS | 60 |
| TEAAIREMGV RFLRYPGGEK SDSYLWSVAP WNGPKPTLAR TGPGEWPAND RGLTASNDGA | 120 |
| WIPGKEPLDF DEFMTMTRNV GGEAVIVVCY DAMYKAQTTN GTRPTRAQLI TSAAEWVRYS | 180 |
| NITKGYGVKY WSIGNETDYN SDGNPGASQY ATDLIDFSNA MKAVDPTIKI GAQGKTSGWF | 240 |
| QTVLSRAAAK IDFLDVHDYA GSDWGLGYDS FRNYAKDLTT SATMAVSAIN AHAPVADRDR | 300 |
| LKVIVSEMGA HSFTGAWDTG NDIGHAIVFF DQIGRHMKMP KVDFVQYWNT RWVDNDVYQL | 360 |
| PVGTTNLLTN GGFENGLDDW PISADATVGN TTASTTEGDA RSGTGALRVA GSTSGGRRRD | 420 |
| ITALVPPDST FTLTAWAKLS NDEVWSNGGI SFYKNGTRIR NLQWDFSGST YKEYTRRFRS | 480 |
| GPDYDRVELW VAKGGGTSVL CVDDFQLVTG GRPGPLTALS STNDLFASAR VLAIWGEYLQ | 540 |
| DKVLSTANTT DVLVHGSLNP ATNRMTVFLI NKQTASRDAV LDLKNYAAPV SAKRRVMKGT | 600 |
| HPGDYMPTWE AAADCPVAAN KVSLTLPALS ITVLDLATAP VITQSAATSA TLPLTNAAAP | 660 |
| LTVLADDDGG EANLTYTWSV TGTPPGPVSF SDNGNNAAKH TTATFTTPGT YELLVTVSDP | 720 |
| SGNTTTSGLS LEVAPSFALW AKAAGLPAGP AGDTDGDGVP NLVEYARGTD PLVHDAATHA | 780 |
| NGGIPIQEGG DFILRYRRDL SRPRLQMGVE RSTNLRDWGT EGITDRETSA DSGFQHRQAA | 840 |
| IPITGDPGFL RVRVTELNPP | 860 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.54 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MKALSLAALL PLVLPLPSVA VEYVAINATN VLADSSRKPI GINMDYLMDS DRRRPDAPRS | 60 |
| TEAAIREMGV RFLRYPGGEK SDSYLWSVAP WNGPKPTLAR TGPGEWPAND RGLTASNDGA | 120 |
| WIPGKEPLDF DEFMTMTRNV GGEAVIVVCY DAMYKAQTTN GTRPTRAQLI TSAAEWVRYS | 180 |
| NITKGYGVKY WSIGNETDYN SDGNPGASQY ATDLIDFSNA MKAVDPTIKI GAQGKTSGWF | 240 |
| QTVLSRAAAK IDFLDVHDYA GSDWGLGYDS FRNYAKDLTT SATMAVSAIN AHAPVADRDR | 300 |
| LKVIVSEMGA HSFTGAWDTG NDIGHAIVFF DQIGRHMKMP KVDFVQYWNT RWVDNDVYQL | 360 |
| PVGTTNLLTN GGFENGLDDW PISADATVGN TTASTTEGDA RSGTGALRVA GSTSGGRRRD | 420 |
| ITALVPPDST FTLTAWAKLS NDEVWSNGGI SFYKNGTRIR NLQWDFSGST YKEYTRRFRS | 480 |
| GPDYDRVELW VAKGGGTSVL CVDDFQLVTG GRPGPLTALS STNDLFASAR VLAIWGEYLQ | 540 |
| DKVLSTANTT DVLVHGSLNP ATNRMTVFLI NKQTASRDAV LDLKNYAAPV SAKRRVMKGT | 600 |
| HPGDYMPTWE AAADCPVAAN KVSLTLPALS ITVLDLATAP VITQSAATSA TLPLTNAAAP | 660 |
| LTVLADDDGG EANLTYTWSV TGTPPGPVSF SDNGNNAAKH TTATFTTPGT YELLVTVSDP | 720 |
| SGNTTTSGLS LEVAPSFALW AKAAGLPAGP AGDTDGDGVP NLVEYARGTD PLVHDAATHA | 780 |
| NGGIPIQEGG DFILRYRRDL SRPRLQMGVE RSTNLRDWGT EGITDRETSA DSGFQHRQAA | 840 |
| IPITGDPGFL RVRVTELNPP | 860 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.