Information for CAZyme ID: UZN23285.1
Basic Information
| GenBank ID | UZN23285.1 |
| Family | GT20 |
| Sequence Length | 727 |
| UniProt ID | A0A972M1C3(100,100) |
| Average pLDDT? | 92.19 |
| CAZy50 ID | 35475 |
| CAZy50 Rep | Yes, UZN23285.1 |
| Structure Cluster | SC_GT20_clus41 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2681877 |
| Kingdom | Bacteria |
| Phylum | |
| Class | |
| Order | |
| Family | |
| Genus | |
| Species | bacterium 3DAC |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MRYIIVSNRL PVTVSRRKGQ FTTKKSVGGL ATGVSAVFEN SEGIWIGWPG MASDTLSMDD | 60 |
| REELEMLLRR DGFEPVFLSS RDIAGYYHGY SNKTLWPLFH YFANYTVFSD SEMWKRYVDV | 120 |
| NRKFAKKIIA LYRDGDIIWV HDYHLFLVPQ MVRKEIPDAT IGFFLHIPFP SYEVFRLLPE | 180 |
| RKELLEGVLG ADLIGFHTYD YVRHFLSSVR RIVGIEHHMG RLWVGKRQIK ASAFPMGIDT | 240 |
| DRFIKLAQSS SVQKKIENYR KKLHGRKLVL SIDRLDYSKG IDLRLKAIER FFDKYPKMRE | 300 |
| KVVFALIVVP SRSQVETYQD MKERIDKLVG QINGKYGGWG VIPIWYMYKS FPQEDLVPLY | 360 |
| ALADVALITP IRDGMNLVAK EYIAVKQGES GMLVLSEMAG AAAELGEAVL VNPMDTDGVA | 420 |
| DAIYEALTMS IEEKRERMGK MFERVKKWNV HRWAEDFVER LEGIKDYHRQ FAGKILTGKA | 480 |
| KKQLKDAFIS ARKRVLLLDY DGTLTKIVRR PEYAKPDKEI KDILKRLSDK AEVVIVSGRD | 540 |
| RKTLDQWFGD LPVSFVAEHG AWIKHKGKDW NTLIAIPSDW KNDIRPIMEL YADRTAGAFV | 600 |
| EEKEHAIAWH YRMALPEHAQ VMAAELKEVL MSLISGKDLE IIDGNKVIEV RVAGINKGIA | 660 |
| SSRFIEDADF ILAAGDDWTD EDMFEAMPEH AWTIKVGPKP SKAKWIVEDV DEMRSLLNEL | 720 |
| STLDMTK | 727 |
Predicted 3D structure by AlphaFold2 with pLDDT = 92.19 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MRYIIVSNRL PVTVSRRKGQ FTTKKSVGGL ATGVSAVFEN SEGIWIGWPG MASDTLSMDD | 60 |
| REELEMLLRR DGFEPVFLSS RDIAGYYHGY SNKTLWPLFH YFANYTVFSD SEMWKRYVDV | 120 |
| NRKFAKKIIA LYRDGDIIWV HDYHLFLVPQ MVRKEIPDAT IGFFLHIPFP SYEVFRLLPE | 180 |
| RKELLEGVLG ADLIGFHTYD YVRHFLSSVR RIVGIEHHMG RLWVGKRQIK ASAFPMGIDT | 240 |
| DRFIKLAQSS SVQKKIENYR KKLHGRKLVL SIDRLDYSKG IDLRLKAIER FFDKYPKMRE | 300 |
| KVVFALIVVP SRSQVETYQD MKERIDKLVG QINGKYGGWG VIPIWYMYKS FPQEDLVPLY | 360 |
| ALADVALITP IRDGMNLVAK EYIAVKQGES GMLVLSEMAG AAAELGEAVL VNPMDTDGVA | 420 |
| DAIYEALTMS IEEKRERMGK MFERVKKWNV HRWAEDFVER LEGIKDYHRQ FAGKILTGKA | 480 |
| KKQLKDAFIS ARKRVLLLDY DGTLTKIVRR PEYAKPDKEI KDILKRLSDK AEVVIVSGRD | 540 |
| RKTLDQWFGD LPVSFVAEHG AWIKHKGKDW NTLIAIPSDW KNDIRPIMEL YADRTAGAFV | 600 |
| EEKEHAIAWH YRMALPEHAQ VMAAELKEVL MSLISGKDLE IIDGNKVIEV RVAGINKGIA | 660 |
| SSRFIEDADF ILAAGDDWTD EDMFEAMPEH AWTIKVGPKP SKAKWIVEDV DEMRSLLNEL | 720 |
| STLDMTK | 727 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.