Information for CAZyme ID: UXN04869.1
Basic Information
| GenBank ID | UXN04869.1 |
| Family | GT51 |
| Sequence Length | 777 |
| UniProt ID | UXN04869.1(MOD) |
| Average pLDDT? | 90.85 |
| CAZy50 ID | 29788 |
| CAZy50 Rep | Yes, UXN04869.1 |
| Structure Cluster | SC_GT51_clus87 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2979331 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Bartonellaceae |
| Genus | Bartonella |
| Species | Bartonella sp. HY406 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MRRRFFTKSR LRRYLRIFLY SFAFLSLVLI ALRLWPHTPL KEQFSYSKLV SDQNGQILRL | 60 |
| TLSKDDHYRL FVPLEDMSPV MVEAIMLKED RYFYSHFGVN PFALFRASLA TYIGGNRQGA | 120 |
| STLTMQLARK IYNINSRSIS GKTQQILAAL WLEARYSKAE ILEAYLNLAP MGGNIEGVEA | 180 |
| ASQIYFHKSA QKLSLNEALA LAVIPQSPTK RASFGLETQK ARLLLLNDWR DANKNDPRSA | 240 |
| ALNDLPITAY TRRDLPFLAP HYSDYLLANY PEDQLQGTLD LKLQKAIEAI NNGYIKDRSR | 300 |
| VGIRNSAILI IDSRDMGIKT MIGSADFFNE KIHGQVNGTI AARSPGSTVK PFLYALAIDQ | 360 |
| GIIHPMTMLK DAPTMFGSFQ PENFDGRFVG PLSAQEALIR SRNVPAVWLA SKTRKPSLYQ | 420 |
| FLKNAGITGL RPEESYGLSI ALGGGEMKML ELASLYASLA KDGKRQFPRF LKTELYHEGE | 480 |
| ALISPEASFI TRQMLYQNPR PDGLPKDRRG KDWPVAWKTG TSWSYHDAWT SGMIGPYIVV | 540 |
| VWIGNFDNSG PTAFIGVRSA APLFFKIADA LPILKPNEKQ LVQLSPKNVV RVDVCAASGD | 600 |
| LPNEYCPKRK QTWFIAGVSP IKISNLHRPL MIDTRSGEIA CPPYDKPYIK QQIFEFWPSD | 660 |
| LNALFDTAGL PRRKPPTQKT CGITVKSDNI SPPQIRYPLV NVTYVLKRDD ENDHIRLEAD | 720 |
| APAGVKRLYW FEKDRFLGVV TPGTSLDWRP KQAGRMQLRV SDENGNTTLR TINVNFN | 777 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.85 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MRRRFFTKSR LRRYLRIFLY SFAFLSLVLI ALRLWPHTPL KEQFSYSKLV SDQNGQILRL | 60 |
| TLSKDDHYRL FVPLEDMSPV MVEAIMLKED RYFYSHFGVN PFALFRASLA TYIGGNRQGA | 120 |
| STLTMQLARK IYNINSRSIS GKTQQILAAL WLEARYSKAE ILEAYLNLAP MGGNIEGVEA | 180 |
| ASQIYFHKSA QKLSLNEALA LAVIPQSPTK RASFGLETQK ARLLLLNDWR DANKNDPRSA | 240 |
| ALNDLPITAY TRRDLPFLAP HYSDYLLANY PEDQLQGTLD LKLQKAIEAI NNGYIKDRSR | 300 |
| VGIRNSAILI IDSRDMGIKT MIGSADFFNE KIHGQVNGTI AARSPGSTVK PFLYALAIDQ | 360 |
| GIIHPMTMLK DAPTMFGSFQ PENFDGRFVG PLSAQEALIR SRNVPAVWLA SKTRKPSLYQ | 420 |
| FLKNAGITGL RPEESYGLSI ALGGGEMKML ELASLYASLA KDGKRQFPRF LKTELYHEGE | 480 |
| ALISPEASFI TRQMLYQNPR PDGLPKDRRG KDWPVAWKTG TSWSYHDAWT SGMIGPYIVV | 540 |
| VWIGNFDNSG PTAFIGVRSA APLFFKIADA LPILKPNEKQ LVQLSPKNVV RVDVCAASGD | 600 |
| LPNEYCPKRK QTWFIAGVSP IKISNLHRPL MIDTRSGEIA CPPYDKPYIK QQIFEFWPSD | 660 |
| LNALFDTAGL PRRKPPTQKT CGITVKSDNI SPPQIRYPLV NVTYVLKRDD ENDHIRLEAD | 720 |
| APAGVKRLYW FEKDRFLGVV TPGTSLDWRP KQAGRMQLRV SDENGNTTLR TINVNFN | 777 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.