Information for CAZyme ID: UWO53211.1
Basic Information
| GenBank ID | UWO53211.1 |
| Family | GH25 |
| Sequence Length | 808 |
| UniProt ID | UWO53211.1(MOD) |
| Average pLDDT? | 89.84 |
| CAZy50 ID | 26564 |
| CAZy50 Rep | Yes, UWO53211.1 |
| Structure Cluster | SC_GH25_clus127 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 100886 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Coprobacillaceae |
| Genus | Catenibacterium |
| Species | Catenibacterium mitsuokai |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKKTFFKFWV IILSCFMVLS NASLPSYSED ISDNEKNDIA NSFRYTDGET REGHSMSLFS | 60 |
| RSAVDSSWPK DSKAIAKGID VSTHNEKIDW KRVKQSGVDY AIIRCGYGTN ETSQDDKRWE | 120 |
| ENVKGCVENN IPYGVYLYSY ADTVAKASSE ADHAIRLLQG KKLSYPVYYD LEEYAVRNKV | 180 |
| SKTGIGDIAE TFCNKLSAKG YTVGIYASKD WFTNYLTDSR FSSWTKWVAQ YNSTCTYTGT | 240 |
| YDMWQCSSTG SVPGISGRVD LNYAYKTFNG PSNVNKPQYS DGLHQVNGGL YYYTNNQINK | 300 |
| SYNGIASYNG NDYLVVNGKV DTSKTGFTQA GVNWYMLSAG KVNKNFTDLY YYNKNWFYIN | 360 |
| KGVLDWSFNG PVSYNNNIYY VESSMITWKY NNVAAYNGIK YYFSSSQIDY GYNDLFYTGD | 420 |
| TWYYIKGGKV DTGFTGLYYF NSDWYYIENG QITWTYTSLV KYNGAIYYVD RSMIRWNHRG | 480 |
| LVESNGTLYY VSNSMVDYNF NDLYEQDGKY YYIKNGQVDK SYTGIYKYNG KRYYIENGVI | 540 |
| NPQYTGVVEN GGNYLYVTKG IVDENYTALT YYKNNWYYFD NGSINWNYSN LILYNNTWYY | 600 |
| IHKGMIHWNY NGVVQYYQTK YCVKNGEVAW NYTGLAQSED GTWYYIKKGV VDYSHSGLIY | 660 |
| YNNEWFYVDH GVINWDYCSL VLYNKRWYYV DHGKINWGYT DLVKYGETWY YVRNGEVDWN | 720 |
| FTDVVYYYGT WYYVKKGKLD WNHTGLFQHS GTWYYIRDGR INYSYKGLVY HSGNYFYVEN | 780 |
| GEVNWNFNGY AQVNNKGTYY KVVNGKRV | 808 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.84 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MKKTFFKFWV IILSCFMVLS NASLPSYSED ISDNEKNDIA NSFRYTDGET REGHSMSLFS | 60 |
| RSAVDSSWPK DSKAIAKGID VSTHNEKIDW KRVKQSGVDY AIIRCGYGTN ETSQDDKRWE | 120 |
| ENVKGCVENN IPYGVYLYSY ADTVAKASSE ADHAIRLLQG KKLSYPVYYD LEEYAVRNKV | 180 |
| SKTGIGDIAE TFCNKLSAKG YTVGIYASKD WFTNYLTDSR FSSWTKWVAQ YNSTCTYTGT | 240 |
| YDMWQCSSTG SVPGISGRVD LNYAYKTFNG PSNVNKPQYS DGLHQVNGGL YYYTNNQINK | 300 |
| SYNGIASYNG NDYLVVNGKV DTSKTGFTQA GVNWYMLSAG KVNKNFTDLY YYNKNWFYIN | 360 |
| KGVLDWSFNG PVSYNNNIYY VESSMITWKY NNVAAYNGIK YYFSSSQIDY GYNDLFYTGD | 420 |
| TWYYIKGGKV DTGFTGLYYF NSDWYYIENG QITWTYTSLV KYNGAIYYVD RSMIRWNHRG | 480 |
| LVESNGTLYY VSNSMVDYNF NDLYEQDGKY YYIKNGQVDK SYTGIYKYNG KRYYIENGVI | 540 |
| NPQYTGVVEN GGNYLYVTKG IVDENYTALT YYKNNWYYFD NGSINWNYSN LILYNNTWYY | 600 |
| IHKGMIHWNY NGVVQYYQTK YCVKNGEVAW NYTGLAQSED GTWYYIKKGV VDYSHSGLIY | 660 |
| YNNEWFYVDH GVINWDYCSL VLYNKRWYYV DHGKINWGYT DLVKYGETWY YVRNGEVDWN | 720 |
| FTDVVYYYGT WYYVKKGKLD WNHTGLFQHS GTWYYIRDGR INYSYKGLVY HSGNYFYVEN | 780 |
| GEVNWNFNGY AQVNNKGTYY KVVNGKRV | 808 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.