Information for CAZyme ID: UWN59040.1
Basic Information
| GenBank ID | UWN59040.1 |
| Family | GH29 |
| Sequence Length | 485 |
| UniProt ID | G5H5U1(100,99.6) |
| Average pLDDT? | 86.40 |
| CAZy50 ID | 72219 |
| CAZy50 Rep | Yes, UWN59040.1 |
| Structure Cluster | SC_GH29_clus1 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 742725 |
| Kingdom | Bacteria |
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MMMRKMGLAA MALLLLGGNA PAQTGGVRQG AAQKDAAQQY GPLRPGVPQR VDMQWWQDSH | 60 |
| YGLFLHMGLY TVAGGEWKGK GGFGEFIQLN NKIPVAEMRE EAKRFNPVQF DANEWVAAAR | 120 |
| RAGMKYIVMG SKHHEGFAMF DSPCNDFNVV KATPFGRDII GELAAACQRQ GMPFGVYYSL | 180 |
| GRDWDDPDCP SNWPREGGRS NDWDYPNERA KEFSRYFERK AMPQVLELLR QYPNISILWF | 240 |
| DTPGYCSPEQ SQRMIDTIQK YRPGCLINDR VGNGLGDFIT PEQTVSGGLD PDPWESCITI | 300 |
| GSSWGYTKRD TVFKSPEIVA RLLTDIVSKG GNLLLNIGPT PWGTFPEKAV ANLDAVGRWL | 360 |
| GTNGEAVYGT RPWRVYGESF VREKIGGKTG AENPDEVKDE TAKGTEPDIR FTKKDNVLYV | 420 |
| FARSWKAPAV RVQDLLLTPH ESVKRVSLLG YKGKIDWKMD GNGIEMSLPG KFRPEVPVYV | 480 |
| YKLEL | 485 |
Predicted 3D structure by AlphaFold2 with pLDDT = 86.40 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MMMRKMGLAA MALLLLGGNA PAQTGGVRQG AAQKDAAQQY GPLRPGVPQR VDMQWWQDSH | 60 |
| YGLFLHMGLY TVAGGEWKGK GGFGEFIQLN NKIPVAEMRE EAKRFNPVQF DANEWVAAAR | 120 |
| RAGMKYIVMG SKHHEGFAMF DSPCNDFNVV KATPFGRDII GELAAACQRQ GMPFGVYYSL | 180 |
| GRDWDDPDCP SNWPREGGRS NDWDYPNERA KEFSRYFERK AMPQVLELLR QYPNISILWF | 240 |
| DTPGYCSPEQ SQRMIDTIQK YRPGCLINDR VGNGLGDFIT PEQTVSGGLD PDPWESCITI | 300 |
| GSSWGYTKRD TVFKSPEIVA RLLTDIVSKG GNLLLNIGPT PWGTFPEKAV ANLDAVGRWL | 360 |
| GTNGEAVYGT RPWRVYGESF VREKIGGKTG AENPDEVKDE TAKGTEPDIR FTKKDNVLYV | 420 |
| FARSWKAPAV RVQDLLLTPH ESVKRVSLLG YKGKIDWKMD GNGIEMSLPG KFRPEVPVYV | 480 |
| YKLEL | 485 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.