Information for CAZyme ID: UVF21364.1
Basic Information
| GenBank ID | UVF21364.1 |
| Family | GH23 |
| Sequence Length | 915 |
| UniProt ID | UVF21364.1(MOD) |
| Average pLDDT? | 76.33 |
| CAZy50 ID | 18524 |
| CAZy50 Rep | Yes, UVF21364.1 |
| Structure Cluster | SC_GH23_clus305 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2740529 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Microvirga |
| Species | Microvirga terrae |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MTIKIPVSAD FNGDDLNKQI GQINARIKLM GDAIAKANGT KFEPITLKTK EDLKYFVQQS | 60 |
| EKLLKIQGEL RNRMQRSGQG SENPVMANWS KMYLNEASRL KRQQEMLVFF GSAFESQSRP | 120 |
| PATPRRPNLP APTTPPANSN QPAGGNSQWW QQTGRILQSG LGQMGPVGGV ASRSVGSGMA | 180 |
| GGFGAGFMGL LGGLAALGIG KALSAATENL DKARDNLVDL DALKRTLGDV NVSFEGLKRV | 240 |
| VEANASSLGI TYSEAIKLSS QFSRLGNVSG DQYKELNGEL LNGVGFSRGF GLDPATGMSF | 300 |
| FGQMRGMRMT GSEQDSRRMG LLIGETIAKS DAFAKSDEVM EAIAGYVTSQ NRNSLTRANI | 360 |
| AGYAGTFSAL AGSGIPGLDV AGTSAMMGRI NSSLMAGGAK GEASQFFTSR VANRMGLSPI | 420 |
| QMAILREGGA FATNSQMFGE GSIYARYMGK AGPGGSTTFL QGTLGELRKA YRDPGMLAMA | 480 |
| TANHLGIGMG QAMSLLSIAP NSMGALERGL AGSGVDISNL TGSGIASLAK VYGSDADRRS | 540 |
| VADSLFRRTG DDALSAADSE RLRNVMGSGS SEDQKKILTE LVASREQERT MGSDVRDARA | 600 |
| ALDNIKTSIA DRLVPLTQEM RHGIMYLAGE GGKVSPQEIT RRVIESEYRG KAEAISGRYS | 660 |
| PLIAEQTQRY NAAKARSLGV PTAEEAQLPR EEQLRAMNER QKAAQAEMDA ASAEIKRLQK | 720 |
| QRDDELAVNS VRAQSAMNPN GINTEILAQI ESGGRHRDAN GNLITSSAGA QGVMQVMPAT | 780 |
| LRNPGFGIAP AKDDSEAENR RVGNALAQAL YNKYGGDVDK AVAAYNWGSG NMDKVIGKYG | 840 |
| ADWRSHIPAE TRGHIDKYNR QAAQLPMTDP GVSGVNVSVS AQPIEVIHRN ERGQQVAPTQ | 900 |
| TLQTKVTPAR PFGTQ | 915 |
Predicted 3D structure by AlphaFold2 with pLDDT = 76.33 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MTIKIPVSAD FNGDDLNKQI GQINARIKLM GDAIAKANGT KFEPITLKTK EDLKYFVQQS | 60 |
| EKLLKIQGEL RNRMQRSGQG SENPVMANWS KMYLNEASRL KRQQEMLVFF GSAFESQSRP | 120 |
| PATPRRPNLP APTTPPANSN QPAGGNSQWW QQTGRILQSG LGQMGPVGGV ASRSVGSGMA | 180 |
| GGFGAGFMGL LGGLAALGIG KALSAATENL DKARDNLVDL DALKRTLGDV NVSFEGLKRV | 240 |
| VEANASSLGI TYSEAIKLSS QFSRLGNVSG DQYKELNGEL LNGVGFSRGF GLDPATGMSF | 300 |
| FGQMRGMRMT GSEQDSRRMG LLIGETIAKS DAFAKSDEVM EAIAGYVTSQ NRNSLTRANI | 360 |
| AGYAGTFSAL AGSGIPGLDV AGTSAMMGRI NSSLMAGGAK GEASQFFTSR VANRMGLSPI | 420 |
| QMAILREGGA FATNSQMFGE GSIYARYMGK AGPGGSTTFL QGTLGELRKA YRDPGMLAMA | 480 |
| TANHLGIGMG QAMSLLSIAP NSMGALERGL AGSGVDISNL TGSGIASLAK VYGSDADRRS | 540 |
| VADSLFRRTG DDALSAADSE RLRNVMGSGS SEDQKKILTE LVASREQERT MGSDVRDARA | 600 |
| ALDNIKTSIA DRLVPLTQEM RHGIMYLAGE GGKVSPQEIT RRVIESEYRG KAEAISGRYS | 660 |
| PLIAEQTQRY NAAKARSLGV PTAEEAQLPR EEQLRAMNER QKAAQAEMDA ASAEIKRLQK | 720 |
| QRDDELAVNS VRAQSAMNPN GINTEILAQI ESGGRHRDAN GNLITSSAGA QGVMQVMPAT | 780 |
| LRNPGFGIAP AKDDSEAENR RVGNALAQAL YNKYGGDVDK AVAAYNWGSG NMDKVIGKYG | 840 |
| ADWRSHIPAE TRGHIDKYNR QAAQLPMTDP GVSGVNVSVS AQPIEVIHRN ERGQQVAPTQ | 900 |
| TLQTKVTPAR PFGTQ | 915 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.