Basic information |
Taxonomy |
Protein Sequence |
Structure visualization |
Binding Residues |
dbCAN domains |
Homology within Cluster
Information for CAZyme ID: USW46749.1
Basic Information
| GenBank ID | USW46749.1 |
| Family | CBM18, CBM50, GH18 |
| Sequence Length | 1435 |
| UniProt ID | A0A9Q9AFV0(100,100) |
| Average pLDDT? | 70.51 |
| CAZy50 ID | 4567 |
| CAZy50 Rep | Yes, USW46749.1 |
| Structure Cluster | SC_CBM18_clus1, SC_GH18_clus125 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 215465 |
| Kingdom | Eukaryota |
| Phylum | Ascomycota |
| Class | Dothideomycetes |
| Order | Mycosphaerellales |
| Family | Mycosphaerellaceae |
| Genus | Septoria |
| Species | Septoria linicola |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MIIRPYWIGV FWTGLRCSKA QQFDSSISKC PVRCNLDDET SWTYYYELSA LEGCDGTTLF | 60 |
| QLNVNNRVDD PNTDVLYRAC TAAGGSVRPP TAVDSRILRR QQLSFNETDQ VSHVVSLSTN | 120 |
| ENTGTASPDD AQSAVAALRG YLAGQEFSTS ITFARSGQAV AGLYAGSQVA PSSGAAVLDQ | 180 |
| LGEYVSSSTS RRVIAQACGS GNQTISTQFF GIVVDTSTNI AAVQDSLRSW NDAECVEEGV | 240 |
| SATWSPIAVD ITSGSRISVV PDAESVGSVE SSADKRSSST RRQSDTCRYT QVQSGDGCYA | 300 |
| VSERCGISIS ELESYNRAGL CNNLQLAEYV CCSPGSLPDF SPQPGSDGMC VAYTVGSGDT | 360 |
| CFAIAEAHQM TVADIEARNT QTWGWTGCNN LLLGARICLS TGDPPFPAEV ENAVCGPQVP | 420 |
| GTVDANPSRN PEDWIDLNAC PLNACCNIWG QCGVTSEFCT IAPSETGNPG TAAPGSNGCV | 480 |
| SNCGTDIISG PAPGSFEHVG YYESFHIDRP CNFMSVPDIP DRYTIVHWAF GEISDDFTAS | 540 |
| ISPYEADWAD FKAATGFKRI ISFGGWAFST ERSSYFIFRE GVSPQNRQRF ADNMIDFVVS | 600 |
| EGLDGIDFDW EYPGAPDSQG EGIPIDAPER ALEYLEFLKL VRAGLPSGLT IGMAAPASFW | 660 |
| YLKAFPMDEI AEVVDYVIYM TYDLHGQWDF GNTYTSPGCP NGDCLRTHIN QTETETSLSM | 720 |
| VTKAGVPANK IYLGQPLYGR SFKMAEAGCW TENCKFTGPA SGARPGRCTG TGGYLSNLEI | 780 |
| REILEGGQFS VEEYYSEEAG DILVYDQTEW VSWAKPSTYE SRSDWARSLG LGGISDWAID | 840 |
| LDITGSRDGV GNGGNGTGGG NGTGEVVFID PSIYQDADPT AFCQPPCTFV FPPWTLPYTT | 900 |
| TITPPPVTST ILNRWTDIIT SQGSGGVTAV ETLTLETTTV TVITIAPITT TEIDVWNFVW | 960 |
| TDTDQSVVTL TSSVQFPPAV VTQDPTSYTT TGDAEETTVE GVTYTFLPGP FPSITATNPS | 1020 |
| PPPTSTLPPG QTSSSTIPVP PPTQSTEPPP NDCDDCPGSI NIEIGPPGPI CEDGCGDLCE | 1080 |
| FGCGGFIPCF PPSGTCNCIG GACPSFPCFG AGCIDFPPGS FPPPGGNLPG GPPPGEPSDP | 1140 |
| EESQSSSSSS SSSSSSTRIN ACPAKTPAPA SDYPARDQPA PILGQGGFGG SGNAGGGGGG | 1200 |
| GGPIETGFPD ETTSGSSPST TSYISCSTQN QQPGQGITQA YCVCSGSTFT QSTATDPPNS | 1260 |
| CAYTTLPGPS ETISISRLPT GPTSTPEPTP EPEPEPEPQP EPEPEPQPPG FQMCIGSSTT | 1320 |
| PTIGGSPVYN YVAYPIDSDC DAGVFIADPN IGSPPDFCDI PRDEPVLDYC DTRARFVNEG | 1380 |
| QEYRETGCAL SVEIDGQVYS DYDPLEASAD DNPCSRRCGT ASISGLLVFT NLPLC | 1435 |
Predicted 3D structure by AlphaFold2 with pLDDT = 70.51 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MIIRPYWIGV FWTGLRCSKA QQFDSSISKC PVRCNLDDET SWTYYYELSA LEGCDGTTLF | 60 |
| QLNVNNRVDD PNTDVLYRAC TAAGGSVRPP TAVDSRILRR QQLSFNETDQ VSHVVSLSTN | 120 |
| ENTGTASPDD AQSAVAALRG YLAGQEFSTS ITFARSGQAV AGLYAGSQVA PSSGAAVLDQ | 180 |
| LGEYVSSSTS RRVIAQACGS GNQTISTQFF GIVVDTSTNI AAVQDSLRSW NDAECVEEGV | 240 |
| SATWSPIAVD ITSGSRISVV PDAESVGSVE SSADKRSSST RRQSDTCRYT QVQSGDGCYA | 300 |
| VSERCGISIS ELESYNRAGL CNNLQLAEYV CCSPGSLPDF SPQPGSDGMC VAYTVGSGDT | 360 |
| CFAIAEAHQM TVADIEARNT QTWGWTGCNN LLLGARICLS TGDPPFPAEV ENAVCGPQVP | 420 |
| GTVDANPSRN PEDWIDLNAC PLNACCNIWG QCGVTSEFCT IAPSETGNPG TAAPGSNGCV | 480 |
| SNCGTDIISG PAPGSFEHVG YYESFHIDRP CNFMSVPDIP DRYTIVHWAF GEISDDFTAS | 540 |
| ISPYEADWAD FKAATGFKRI ISFGGWAFST ERSSYFIFRE GVSPQNRQRF ADNMIDFVVS | 600 |
| EGLDGIDFDW EYPGAPDSQG EGIPIDAPER ALEYLEFLKL VRAGLPSGLT IGMAAPASFW | 660 |
| YLKAFPMDEI AEVVDYVIYM TYDLHGQWDF GNTYTSPGCP NGDCLRTHIN QTETETSLSM | 720 |
| VTKAGVPANK IYLGQPLYGR SFKMAEAGCW TENCKFTGPA SGARPGRCTG TGGYLSNLEI | 780 |
| REILEGGQFS VEEYYSEEAG DILVYDQTEW VSWAKPSTYE SRSDWARSLG LGGISDWAID | 840 |
| LDITGSRDGV GNGGNGTGGG NGTGEVVFID PSIYQDADPT AFCQPPCTFV FPPWTLPYTT | 900 |
| TITPPPVTST ILNRWTDIIT SQGSGGVTAV ETLTLETTTV TVITIAPITT TEIDVWNFVW | 960 |
| TDTDQSVVTL TSSVQFPPAV VTQDPTSYTT TGDAEETTVE GVTYTFLPGP FPSITATNPS | 1020 |
| PPPTSTLPPG QTSSSTIPVP PPTQSTEPPP NDCDDCPGSI NIEIGPPGPI CEDGCGDLCE | 1080 |
| FGCGGFIPCF PPSGTCNCIG GACPSFPCFG AGCIDFPPGS FPPPGGNLPG GPPPGEPSDP | 1140 |
| EESQSSSSSS SSSSSSTRIN ACPAKTPAPA SDYPARDQPA PILGQGGFGG SGNAGGGGGG | 1200 |
| GGPIETGFPD ETTSGSSPST TSYISCSTQN QQPGQGITQA YCVCSGSTFT QSTATDPPNS | 1260 |
| CAYTTLPGPS ETISISRLPT GPTSTPEPTP EPEPEPEPQP EPEPEPQPPG FQMCIGSSTT | 1320 |
| PTIGGSPVYN YVAYPIDSDC DAGVFIADPN IGSPPDFCDI PRDEPVLDYC DTRARFVNEG | 1380 |
| QEYRETGCAL SVEIDGQVYS DYDPLEASAD DNPCSRRCGT ASISGLLVFT NLPLC | 1435 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.