CAZyme3D

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Entry ID

Information for CAZyme ID: USP73332.1

Basic Information

GenBank IDUSP73332.1
FamilyGH32
Sequence Length758
UniProt IDA0A9Q8YZU0(100,100)Download
Average pLDDT?82.85
CAZy50 ID31905
CAZy50 RepYes, USP73332.1
Structure ClusterSC_GH32_clus33
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID95742
KingdomEukaryota
PhylumAscomycota
ClassDothideomycetes
OrderPleosporales
FamilyPleosporaceae
GenusCurvularia
SpeciesCurvularia clavata

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MYKLAVAAEG  AGVAETIEGM  AVDTNIPWNQ  LQSPTPHKCK  RSCARAALLQ  SVPTKYVTIP60
CFLPVACRDP  GRIRIETWIS  GGYSATNNST  PSKNGLSADI  TRTVGETAAS  PVSTSSTLSI120
MFRSSPLLSL  ALGSLSAVGA  QELPAVLTAD  IIQGLGNNTL  FNRWRPTYHF  SGPAGWLNDP180
CGMLYDPTTK  TYHLHYQWHP  NHVNWGNISW  GHATSKDMIT  WTDVGGWEDD  KAQSLGTGPN240
PDSRNSSYYG  LGIFSGTGQP  YNLQGEQDGT  LINFYTSVQY  LPTNWQIPYI  PGTEKQSIAI300
SKDGGKTWEQ  YAGNPILSHP  PEGWNITGWR  DPFVEPWPEM  DALLGHKEPH  WYMAMGSGIK360
GENGGGRIPF  YSAPASNLTD  WTFLGALWEP  KRNETLGSLL  ETGTYGFNFE  VSNFFSLTDK420
DDDVHYYVLM  GTEGGNLTWH  PRAQWGLWNE  GQVTKRENGS  VEFTPLSGGA  IDSGLLYAVT480
SFMDTKNDRR  IQWGWANEEN  NNFAITQSGY  QGAMAIPREM  YVIKTNHLTN  NNSQLTTKGN540
TRVVEHSNGT  FTGYTLGARP  LPEIVEALHN  GSEPQVIQTK  KDGCANGEIS  GNGTSHMHLQ600
VTLSDFTGPA  GVVIAQSPNH  EEQTIVWYSP  ENYTINVDRS  HSSSIQEFAN  YTMLGYFAPY660
TFANGTTESL  HMDIFIDGSL  VEVHVNDRFW  LTTRIYPART  DSTGFGIWAE  EGATVKAQDM720
KVWDIDLNIF  PERPVNSSSK  LVYDTPEETN  NYVWWTGN758

Predicted 3D structure by AlphaFold2 with pLDDT = 82.85 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MYKLAVAAEG  AGVAETIEGM  AVDTNIPWNQ  LQSPTPHKCK  RSCARAALLQ  SVPTKYVTIP60
CFLPVACRDP  GRIRIETWIS  GGYSATNNST  PSKNGLSADI  TRTVGETAAS  PVSTSSTLSI120
MFRSSPLLSL  ALGSLSAVGA  QELPAVLTAD  IIQGLGNNTL  FNRWRPTYHF  SGPAGWLNDP180
CGMLYDPTTK  TYHLHYQWHP  NHVNWGNISW  GHATSKDMIT  WTDVGGWEDD  KAQSLGTGPN240
PDSRNSSYYG  LGIFSGTGQP  YNLQGEQDGT  LINFYTSVQY  LPTNWQIPYI  PGTEKQSIAI300
SKDGGKTWEQ  YAGNPILSHP  PEGWNITGWR  DPFVEPWPEM  DALLGHKEPH  WYMAMGSGIK360
GENGGGRIPF  YSAPASNLTD  WTFLGALWEP  KRNETLGSLL  ETGTYGFNFE  VSNFFSLTDK420
DDDVHYYVLM  GTEGGNLTWH  PRAQWGLWNE  GQVTKRENGS  VEFTPLSGGA  IDSGLLYAVT480
SFMDTKNDRR  IQWGWANEEN  NNFAITQSGY  QGAMAIPREM  YVIKTNHLTN  NNSQLTTKGN540
TRVVEHSNGT  FTGYTLGARP  LPEIVEALHN  GSEPQVIQTK  KDGCANGEIS  GNGTSHMHLQ600
VTLSDFTGPA  GVVIAQSPNH  EEQTIVWYSP  ENYTINVDRS  HSSSIQEFAN  YTMLGYFAPY660
TFANGTTESL  HMDIFIDGSL  VEVHVNDRFW  LTTRIYPART  DSTGFGIWAE  EGATVKAQDM720
KVWDIDLNIF  PERPVNSSSK  LVYDTPEETN  NYVWWTGN758

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH32(169-527)

MYKLAVAAEG  AGVAETIEGM  AVDTNIPWNQ  LQSPTPHKCK  RSCARAALLQ  SVPTKYVTIP60
CFLPVACRDP  GRIRIETWIS  GGYSATNNST  PSKNGLSADI  TRTVGETAAS  PVSTSSTLSI120
MFRSSPLLSL  ALGSLSAVGA  QELPAVLTAD  IIQGLGNNTL  FNRWRPTYHF  SGPAGWLNDP180
CGMLYDPTTK  TYHLHYQWHP  NHVNWGNISW  GHATSKDMIT  WTDVGGWEDD  KAQSLGTGPN240
PDSRNSSYYG  LGIFSGTGQP  YNLQGEQDGT  LINFYTSVQY  LPTNWQIPYI  PGTEKQSIAI300
SKDGGKTWEQ  YAGNPILSHP  PEGWNITGWR  DPFVEPWPEM  DALLGHKEPH  WYMAMGSGIK360
GENGGGRIPF  YSAPASNLTD  WTFLGALWEP  KRNETLGSLL  ETGTYGFNFE  VSNFFSLTDK420
DDDVHYYVLM  GTEGGNLTWH  PRAQWGLWNE  GQVTKRENGS  VEFTPLSGGA  IDSGLLYAVT480
SFMDTKNDRR  IQWGWANEEN  NNFAITQSGY  QGAMAIPREM  YVIKTNHLTN  NNSQLTTKGN540
TRVVEHSNGT  FTGYTLGARP  LPEIVEALHN  GSEPQVIQTK  KDGCANGEIS  GNGTSHMHLQ600
VTLSDFTGPA  GVVIAQSPNH  EEQTIVWYSP  ENYTINVDRS  HSSSIQEFAN  YTMLGYFAPY660
TFANGTTESL  HMDIFIDGSL  VEVHVNDRFW  LTTRIYPART  DSTGFGIWAE  EGATVKAQDM720
KVWDIDLNIF  PERPVNSSSK  LVYDTPEETN  NYVWWTGN758

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help