CAZyme3D

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Entry ID

Information for CAZyme ID: UPK94759.1

Basic Information

GenBank IDUPK94759.1
FamilyAA3_2
Sequence Length625
UniProt IDA0A428UJ16(91.8,100)Download
Average pLDDT?91.33
CAZy50 ID48902
CAZy50 RepYes, UPK94759.1
Structure ClusterSC_AA3_clus123
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2747967
KingdomEukaryota
PhylumAscomycota
ClassSordariomycetes
OrderHypocreales
FamilyNectriaceae
GenusFusarium
SpeciesFusarium solani-melongenae

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTAWGLLFGL  VALCALPWSE  ALHFVPEAAN  DALRSVYDYI  IVGGGTAGLT  IANRLSENSS60
VSVLVIEAGP  LDDARNLTIP  KGLLPVPGVI  GNGGWSEYEW  GLITEPQTYL  NDQYMEIPQG120
KAIGGSSILN  GLCWTRGPAS  DYDGWEKLGN  KGWSWNDMLP  YFKKSENFKA  NAYKEDADAL180
RIHPDLSMHG  NNGSVHVSYP  RYFYNQSTNV  LDGFSELGIP  IIDDPNNGTA  AGAMLLPSSM240
HPTNQTRSDA  REAHFNSANH  RSNLHIATGQ  TVTRLTFEPY  NRFTGSRRVV  GVEFAEDQKA300
RKRTIVCKRE  VIVSAGAIFS  PTLLQVSGIG  PSKTLESLEI  PVEIDLPGVG  YNLQDHPMIY360
ATYYYGNSSL  FKSDAIIGEV  HDQVSRMYIN  NRTGPWTAPL  INTVAFPNLQ  SSSGEAVPED420
APPSVKIGYE  LQKEILREQV  LKNDMGIFET  MANSWGQLTV  AAQKTFSRGT  VRPSTSSIFD480
PPLLDPRYCS  DPIDCEIIVL  GLQLNMKLIE  TKAMKELMPQ  PYTAFNTTDH  DNLMREVLKG540
LTTERHPSGT  VAMMPRDMGG  VVDPELRVYG  TCNLRVADAS  IMPLIPSAHL  QAVVYAIAEK600
AADMIKATTP  DCPHGPFPPK  PRPTD625

Predicted 3D structure by AlphaFold2 with pLDDT = 91.33 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MTAWGLLFGL  VALCALPWSE  ALHFVPEAAN  DALRSVYDYI  IVGGGTAGLT  IANRLSENSS60
VSVLVIEAGP  LDDARNLTIP  KGLLPVPGVI  GNGGWSEYEW  GLITEPQTYL  NDQYMEIPQG120
KAIGGSSILN  GLCWTRGPAS  DYDGWEKLGN  KGWSWNDMLP  YFKKSENFKA  NAYKEDADAL180
RIHPDLSMHG  NNGSVHVSYP  RYFYNQSTNV  LDGFSELGIP  IIDDPNNGTA  AGAMLLPSSM240
HPTNQTRSDA  REAHFNSANH  RSNLHIATGQ  TVTRLTFEPY  NRFTGSRRVV  GVEFAEDQKA300
RKRTIVCKRE  VIVSAGAIFS  PTLLQVSGIG  PSKTLESLEI  PVEIDLPGVG  YNLQDHPMIY360
ATYYYGNSSL  FKSDAIIGEV  HDQVSRMYIN  NRTGPWTAPL  INTVAFPNLQ  SSSGEAVPED420
APPSVKIGYE  LQKEILREQV  LKNDMGIFET  MANSWGQLTV  AAQKTFSRGT  VRPSTSSIFD480
PPLLDPRYCS  DPIDCEIIVL  GLQLNMKLIE  TKAMKELMPQ  PYTAFNTTDH  DNLMREVLKG540
LTTERHPSGT  VAMMPRDMGG  VVDPELRVYG  TCNLRVADAS  IMPLIPSAHL  QAVVYAIAEK600
AADMIKATTP  DCPHGPFPPK  PRPTD625

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : AA3_2(37-607)

MTTWGLLLGL  VALCALPWSE  ALHFTPENAN  STLRSVYDYI  IVGGGTAGLT  IANRLSENSS60
VSVLVLEAGP  LDDARNLTIP  KGLLPVPGVI  GNGGWSEYEW  GLITEPQTYL  NDQYMEIPQG120
KAIGGSSILN  GLCWTRGPAS  DYDGWEKLGN  KGWSWNDMLP  YFKKSEMFNA  NAYKKDADAL180
RIHPDLSMHG  SNGSVHVSYP  RYFYSQSTNV  LDGFSELGIP  IIDDPNNGTA  AGAMLLPSSM240
HPTNQTRFDA  REAHFNPADH  RSNLHVATGQ  TVTRLILEPF  NRFTGTRRVV  AVEFAEDKKA300
KKRMVVCKKE  VIVSAGAIFS  PTLLQVSGIG  PAKVLESLDI  PVEIDLPGVG  YNLQDHPMIY360
ATYYYHNSSL  FKSDAIIGEV  HDQVSRMYFN  NRTGPWTAPL  INTVAFPSLQ  SVTDSWKDFV420
DDKSSGEAIP  DDAPQSVKIG  YEAQKEILRE  QVLSNDMGIF  ETMANSWGQL  TVAAQKTFSR480
GTVRPSTSSI  FDPPLLDPRY  CSDPIDCEII  VLGLQLNMKL  IETKAMKELM  PQPYTAFNTT540
DHDKLMREVL  RGLTTERHPS  GTVAMMPRDM  GGVVDPELRV  YGTCNLRVAD  ASIMPLIPSA600
HLQAVVYAIA  EKAADMIKAT  TPDCPHGPFP  PKPRPTN637

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help