Information for CAZyme ID: UOB17148.1
Basic Information
GenBank ID | UOB17148.1 |
Family | GH2 |
Sequence Length | 838 |
UniProt ID | A0A9E6ZQW9(100,100)![]() |
Average pLDDT? | 93.55 |
CAZy50 ID | 23914 |
CAZy50 Rep | Yes, UOB17148.1 |
Structure Cluster | SC_GH2_clus103 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2926907 |
Kingdom | Bacteria |
Phylum | Bacteroidota |
Class | Flavobacteriia |
Order | Flavobacteriales |
Family | Flavobacteriaceae |
Genus | Abyssalbus |
Species | Abyssalbus ytuae |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MSRNIFILIS CLFYLRLFSQ KTVLEDWEFS LDNEPAAFCN VKIPHTWNKN DAFDDAGGYY | 60 |
RGIGTYKKKI IIKDISKKYY LHFKGSNQFT TLWINNRKVG EHRGGYTSFS FDISDFIQKN | 120 |
ENEITITVNN SHNEKIPPLD ADFTFYGGIY RSVYLVEENF IHFKKHLGND YVKTDAVVTK | 180 |
EKKGRVTIHA VITNSENTQK GGLHLSLISP EGTVKTINKK IKLQEGENKF IIDYEIESPL | 240 |
LWSVQTPNLY KLTAEILDKK GLVQDSYSCN IGFRTIQATT KGFFLNGDYL KLTGVNRHQD | 300 |
LEGYGNAVPV HLQLDDLVKI KEMGSNFLRL AHYPQDEEIY KAADSLGLIL WSEIPVVNKV | 360 |
PLGNDYESYK ENALLMQKEH IFQNYNHPSF VFVGYMNEIF LRTVFDSPAE ETKQQIVNNT | 420 |
LDLAGALEDL TRKEAPGHIT VMALHGNQIY NETGIAQIPM VIGWNLYFGW YGGNIYDLGG | 480 |
FLDKENKKFP NRPLIISEYG VGADVRLHNE NPEIFDFSEE YQLDYHIGYW NQVHERDFVI | 540 |
GMSAWNFADF GSEFRGDAMP HINQKGLVNF NRIPKNIYYW YKATMKPTEK LTRIYRDLPV | 600 |
HLSNSPKKLL KIISNQPVIV KLNGNSIANE SPLNNLINLE INLVKGQNVI EVYGRNDILL | 660 |
DKEIIEWKKP LITNKGDLLA INLGSKNYFK DTENVIWYPV TTSTGNIYLA GNIKQVKTSA | 720 |
NVKGTSNDPV YQYGLSGLNE IKIEVPKGKY EVKLLYANLL KRKAIAYELK TEKEPGEIIS | 780 |
KPIKFYVNNL LVEIDTKEKL TKFEKTIITE VKNDQLQISS ATSAPFTLSG IMIKKIEL | 838 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.55 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MSRNIFILIS CLFYLRLFSQ KTVLEDWEFS LDNEPAAFCN VKIPHTWNKN DAFDDAGGYY | 60 |
RGIGTYKKKI IIKDISKKYY LHFKGSNQFT TLWINNRKVG EHRGGYTSFS FDISDFIQKN | 120 |
ENEITITVNN SHNEKIPPLD ADFTFYGGIY RSVYLVEENF IHFKKHLGND YVKTDAVVTK | 180 |
EKKGRVTIHA VITNSENTQK GGLHLSLISP EGTVKTINKK IKLQEGENKF IIDYEIESPL | 240 |
LWSVQTPNLY KLTAEILDKK GLVQDSYSCN IGFRTIQATT KGFFLNGDYL KLTGVNRHQD | 300 |
LEGYGNAVPV HLQLDDLVKI KEMGSNFLRL AHYPQDEEIY KAADSLGLIL WSEIPVVNKV | 360 |
PLGNDYESYK ENALLMQKEH IFQNYNHPSF VFVGYMNEIF LRTVFDSPAE ETKQQIVNNT | 420 |
LDLAGALEDL TRKEAPGHIT VMALHGNQIY NETGIAQIPM VIGWNLYFGW YGGNIYDLGG | 480 |
FLDKENKKFP NRPLIISEYG VGADVRLHNE NPEIFDFSEE YQLDYHIGYW NQVHERDFVI | 540 |
GMSAWNFADF GSEFRGDAMP HINQKGLVNF NRIPKNIYYW YKATMKPTEK LTRIYRDLPV | 600 |
HLSNSPKKLL KIISNQPVIV KLNGNSIANE SPLNNLINLE INLVKGQNVI EVYGRNDILL | 660 |
DKEIIEWKKP LITNKGDLLA INLGSKNYFK DTENVIWYPV TTSTGNIYLA GNIKQVKTSA | 720 |
NVKGTSNDPV YQYGLSGLNE IKIEVPKGKY EVKLLYANLL KRKAIAYELK TEKEPGEIIS | 780 |
KPIKFYVNNL LVEIDTKEKL TKFEKTIITE VKNDQLQISS ATSAPFTLSG IMIKKIEL | 838 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.