CAZyme3D

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Entry ID

Information for CAZyme ID: UJR08898.1

Basic Information

GenBank IDUJR08898.1
FamilyGH31
Sequence Length2199
UniProt IDUJR08898.1(MOD)Download
Average pLDDT?72.64
CAZy50 ID1108
CAZy50 RepYes, UJR08898.1
Structure ClusterSC_GH31_clus33
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID104782
KingdomEukaryota
PhylumRotifera
ClassEurotatoria
OrderAdinetida
FamilyAdinetidae
GenusAdineta
SpeciesAdineta vaga

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTNLFRGNAQ  PSSLQLAIEK  ATDGNQSSED  WSLIMKICDH  VSSHEESPKE  AMKTIRKRLQ60
INPTTHGWRT  IGLTLTLLEA  LTKNCGKIFH  LQIAHKDFLK  ELKGVIGPKN  NPPLSVQERV120
LGMIQTWALA  FHQDPDLKSV  DHFYQDCKQQ  GLAFPPAEPE  NIIKAAVPAT  GTIERPSQYS180
RSPSQPGSTV  MTRDNRSASD  GSSYPIGHNP  AASQTMSADQ  LGKLRSELDV  VQTNAQVFGE240
MLVTLQPGEE  NPQDFELLME  LHNTCKQMQA  RIVHLLAQVS  SDDITVDLLR  YNDEFNNSFK300
TFESYMQERD  RRFGATHKPT  SNQSIASSRT  INSTTSTAIA  SNADNEPALI  QFDDEPITLT360
SGLQNMNINS  TISSVIPKNT  QQPSTASVVT  RSGTNPQDPE  RDVKEIEEWL  KFQGDENDTN420
ELTRPQANGT  TDAFNNFLQK  RASAIPEQAT  SSLNNSKSSP  RFWPNLLVFI  DPTKDIQKDL480
VEKQCANSHY  IQKNPWIHLM  LSKRIDTAID  EFCCLCLRDH  IYPWLSIITQ  DDSLVYEAKH540
VFRFLLATVV  RRVQNIDINA  FFLERFLPLI  FQTFDRYIQT  IKSTSADESQ  SSIEFLKKMY600
KNDLHIAMYN  RQSEMKFLKR  LILDLMPIIT  PKFIYECKGS  RHFLTEVIAS  QILLDGIDAA660
CEPDTLNRLF  HLYFTTAIQR  RNGMSNVIVP  PPSSSVELLT  RFCTMNGPLH  KNQLALELTD720
VMYEKELLNQ  FSRVLDRHGS  IGLLSIYVTL  SDILNDIPSA  SNILVRKKIY  QRLKNIDERY780
LNPKTSDAHV  SISNIHDPND  TLVNDIKDLI  YNHLEASITE  STEDDKSDNS  MQAFDVPHTF840
TLLSRFHCKI  YELVEQKYQQ  CFLSSDEHFL  YICGRRMDSP  DYRMKDQKNT  NDTTRQRTAS900
KPYTTTSYQE  LEEKDDANLK  CPEDTASIGS  NSSYDDRDLN  TWRVQISHAE  EVRENPTNNG960
PMTIDDEKSN  WLVARRYTDF  YLLEQKLTEF  HGVFSDARLP  PRRSGTIARS  VEFLQSLKKD1020
FEYFLRHLLS  KPTLRNSELL  YNFLTQPDEF  TLPNGEIILA  KMIKVVPRRL  RIEKGQYLDP1080
FLISLINYAE  PAKPKATQPS  PIFTDIIEAK  LQNTMFGNNA  NITESIAEFT  TEKSTNEEHE1140
SAYDHLIVIA  KQVFSASPLL  IYILDLLRVP  LNNSFNSFFS  HFVDETVDEI  LADEENILDV1200
IHALRDTIFP  NDAEKKGPTD  HVNFDDVVAA  AEEYLPKPIK  LVLGKSNIQN  GLQMILRYFQ1260
DPLLNKQLFY  MILDEILLQI  FPELQAHSEK  LNTHKCSINS  NRMAHLSILL  SFFFISFASC1320
QQCEQSSDVA  RFDCYPENGA  SQEKCLARNC  CWREPTEKLN  HISKHPSAFR  DVNVPYCYYP1380
KDFPTYVLQT  NEQTDFGQRL  RINKSQTTYM  PHDIIDLTVD  LIYETAQRFR  IRIYDTVYNR1440
YEVPLEVPKI  EKKVNQTDYD  VKINSNPFSL  LVTRKTTGVI  LFDSSVSPLI  FADQFIKFST1500
RLSSPLVYGL  GEHRQGFVIN  ITNQWKKLTF  WSRDFPPVQN  INLYGVHPFH  INPEFTSDES1560
TSFHGQFFLN  SNAMDIDLQP  LPALTYTTIG  GIIDLYVFSG  PTVQNVIEQY  WDVIGKPMMP1620
PHWSLGFHLC  RYGYNSIDNM  IATIKRMDAA  DFPYDVQWTD  IDTMSSYLDF  TYDEKNFRGL1680
PDLVRTIQAS  GKRYVNIIDP  GISSIQPAGT  YVPYEDGLKK  NIFMKKYNSS  EIILGKVWPG1740
ITAFPDFTNP  NATDWWTNIA  SAFHDIVPFD  GMWIDMNEPS  SFLDGSSDGC  TTNYLDNPPF1800
VPNVLGANLN  SKSLCPSAQQ  YLSLHYNLHS  MFGYFEAKAS  NAAMKTIRKK  RPFILSRSTF1860
AGSGKFTAHW  TGDNRATFDD  MYFSIPAILN  FNMFGVTHVG  ADICGFGLET  TEELCTRWMQ1920
LGAFYPFMRN  HNDLGQKDQD  PASFSYQAQQ  SMKQALLMRY  SLVPFWYTLH  YEATVISRTI1980
VQPLFFEFPD  DLNTYNIDQQ  FLIGRAILVS  PNLKIGATSV  YAYFPSDTWY  EFPSGTKFEI2040
VGSFTTLDAP  LSKINVHVRA  GFIIPMQIPG  DNLIIGRDNP  FTLLVAQSQW  GNASGNLFWD2100
DGDSIDSIET  KTYNYLEFSL  TNAATLTINA  LVTNYKDSPM  RLELIKILGV  NKSVINVNVN2160
GKLYPNFLYN  LYDQILLIYG  LDLNMIDEPV  QTIQWTMTN2199

Predicted 3D structure by AlphaFold2 with pLDDT = 72.64 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MTNLFRGNAQ  PSSLQLAIEK  ATDGNQSSED  WSLIMKICDH  VSSHEESPKE  AMKTIRKRLQ60
INPTTHGWRT  IGLTLTLLEA  LTKNCGKIFH  LQIAHKDFLK  ELKGVIGPKN  NPPLSVQERV120
LGMIQTWALA  FHQDPDLKSV  DHFYQDCKQQ  GLAFPPAEPE  NIIKAAVPAT  GTIERPSQYS180
RSPSQPGSTV  MTRDNRSASD  GSSYPIGHNP  AASQTMSADQ  LGKLRSELDV  VQTNAQVFGE240
MLVTLQPGEE  NPQDFELLME  LHNTCKQMQA  RIVHLLAQVS  SDDITVDLLR  YNDEFNNSFK300
TFESYMQERD  RRFGATHKPT  SNQSIASSRT  INSTTSTAIA  SNADNEPALI  QFDDEPITLT360
SGLQNMNINS  TISSVIPKNT  QQPSTASVVT  RSGTNPQDPE  RDVKEIEEWL  KFQGDENDTN420
ELTRPQANGT  TDAFNNFLQK  RASAIPEQAT  SSLNNSKSSP  RFWPNLLVFI  DPTKDIQKDL480
VEKQCANSHY  IQKNPWIHLM  LSKRIDTAID  EFCCLCLRDH  IYPWLSIITQ  DDSLVYEAKH540
VFRFLLATVV  RRVQNIDINA  FFLERFLPLI  FQTFDRYIQT  IKSTSADESQ  SSIEFLKKMY600
KNDLHIAMYN  RQSEMKFLKR  LILDLMPIIT  PKFIYECKGS  RHFLTEVIAS  QILLDGIDAA660
CEPDTLNRLF  HLYFTTAIQR  RNGMSNVIVP  PPSSSVELLT  RFCTMNGPLH  KNQLALELTD720
VMYEKELLNQ  FSRVLDRHGS  IGLLSIYVTL  SDILNDIPSA  SNILVRKKIY  QRLKNIDERY780
LNPKTSDAHV  SISNIHDPND  TLVNDIKDLI  YNHLEASITE  STEDDKSDNS  MQAFDVPHTF840
TLLSRFHCKI  YELVEQKYQQ  CFLSSDEHFL  YICGRRMDSP  DYRMKDQKNT  NDTTRQRTAS900
KPYTTTSYQE  LEEKDDANLK  CPEDTASIGS  NSSYDDRDLN  TWRVQISHAE  EVRENPTNNG960
PMTIDDEKSN  WLVARRYTDF  YLLEQKLTEF  HGVFSDARLP  PRRSGTIARS  VEFLQSLKKD1020
FEYFLRHLLS  KPTLRNSELL  YNFLTQPDEF  TLPNGEIILA  KMIKVVPRRL  RIEKGQYLDP1080
FLISLINYAE  PAKPKATQPS  PIFTDIIEAK  LQNTMFGNNA  NITESIAEFT  TEKSTNEEHE1140
SAYDHLIVIA  KQVFSASPLL  IYILDLLRVP  LNNSFNSFFS  HFVDETVDEI  LADEENILDV1200
IHALRDTIFP  NDAEKKGPTD  HVNFDDVVAA  AEEYLPKPIK  LVLGKSNIQN  GLQMILRYFQ1260
DPLLNKQLFY  MILDEILLQI  FPELQAHSEK  LNTHKCSINS  NRMAHLSILL  SFFFISFASC1320
QQCEQSSDVA  RFDCYPENGA  SQEKCLARNC  CWREPTEKLN  HISKHPSAFR  DVNVPYCYYP1380
KDFPTYVLQT  NEQTDFGQRL  RINKSQTTYM  PHDIIDLTVD  LIYETAQRFR  IRIYDTVYNR1440
YEVPLEVPKI  EKKVNQTDYD  VKINSNPFSL  LVTRKTTGVI  LFDSSVSPLI  FADQFIKFST1500
RLSSPLVYGL  GEHRQGFVIN  ITNQWKKLTF  WSRDFPPVQN  INLYGVHPFH  INPEFTSDES1560
TSFHGQFFLN  SNAMDIDLQP  LPALTYTTIG  GIIDLYVFSG  PTVQNVIEQY  WDVIGKPMMP1620
PHWSLGFHLC  RYGYNSIDNM  IATIKRMDAA  DFPYDVQWTD  IDTMSSYLDF  TYDEKNFRGL1680
PDLVRTIQAS  GKRYVNIIDP  GISSIQPAGT  YVPYEDGLKK  NIFMKKYNSS  EIILGKVWPG1740
ITAFPDFTNP  NATDWWTNIA  SAFHDIVPFD  GMWIDMNEPS  SFLDGSSDGC  TTNYLDNPPF1800
VPNVLGANLN  SKSLCPSAQQ  YLSLHYNLHS  MFGYFEAKAS  NAAMKTIRKK  RPFILSRSTF1860
AGSGKFTAHW  TGDNRATFDD  MYFSIPAILN  FNMFGVTHVG  ADICGFGLET  TEELCTRWMQ1920
LGAFYPFMRN  HNDLGQKDQD  PASFSYQAQQ  SMKQALLMRY  SLVPFWYTLH  YEATVISRTI1980
VQPLFFEFPD  DLNTYNIDQQ  FLIGRAILVS  PNLKIGATSV  YAYFPSDTWY  EFPSGTKFEI2040
VGSFTTLDAP  LSKINVHVRA  GFIIPMQIPG  DNLIIGRDNP  FTLLVAQSQW  GNASGNLFWD2100
DGDSIDSIET  KTYNYLEFSL  TNAATLTINA  LVTNYKDSPM  RLELIKILGV  NKSVINVNVN2160
GKLYPNFLYN  LYDQILLIYG  LDLNMIDEPV  QTIQWTMTN2199

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH31(1596-2064)

MTNLFRGNAQ  PSSLQLAIEK  ATDGNQSSED  WSLIMKICDH  VSSHEESPKE  AMKTIRKRLQ60
INPTTHGWRT  IGLTLTLLEA  LTKNCGKIFH  LQIAHKDFLK  ELKGVIGPKN  NPPLSVQERV120
LGMIQTWALA  FHQDPDLKSV  DHFYQDCKQQ  GLAFPPAEPE  NIIKAAVPAT  GTIERPSQYS180
RSPSQPGSTV  MTRDNRSASD  GSSYPIGHNP  AASQTMSADQ  LGKLRSELDV  VQTNAQVFGE240
MLVTLQPGEE  NPQDFELLME  LHNTCKQMQA  RIVHLLAQVS  SDDITVDLLR  YNDEFNNSFK300
TFESYMQERD  RRFGATHKPT  SNQSIASSRT  INSTTSTAIA  SNADNEPALI  QFDDEPITLT360
SGLQNMNINS  TISSVIPKNT  QQPSTASVVT  RSGTNPQDPE  RDVKEIEEWL  KFQGDENDTN420
ELTRPQANGT  TDAFNNFLQK  RASAIPEQAT  SSLNNSKSSP  RFWPNLLVFI  DPTKDIQKDL480
VEKQCANSHY  IQKNPWIHLM  LSKRIDTAID  EFCCLCLRDH  IYPWLSIITQ  DDSLVYEAKH540
VFRFLLATVV  RRVQNIDINA  FFLERFLPLI  FQTFDRYIQT  IKSTSADESQ  SSIEFLKKMY600
KNDLHIAMYN  RQSEMKFLKR  LILDLMPIIT  PKFIYECKGS  RHFLTEVIAS  QILLDGIDAA660
CEPDTLNRLF  HLYFTTAIQR  RNGMSNVIVP  PPSSSVELLT  RFCTMNGPLH  KNQLALELTD720
VMYEKELLNQ  FSRVLDRHGS  IGLLSIYVTL  SDILNDIPSA  SNILVRKKIY  QRLKNIDERY780
LNPKTSDAHV  SISNIHDPND  TLVNDIKDLI  YNHLEASITE  STEDDKSDNS  MQAFDVPHTF840
TLLSRFHCKI  YELVEQKYQQ  CFLSSDEHFL  YICGRRMDSP  DYRMKDQKNT  NDTTRQRTAS900
KPYTTTSYQE  LEEKDDANLK  CPEDTASIGS  NSSYDDRDLN  TWRVQISHAE  EVRENPTNNG960
PMTIDDEKSN  WLVARRYTDF  YLLEQKLTEF  HGVFSDARLP  PRRSGTIARS  VEFLQSLKKD1020
FEYFLRHLLS  KPTLRNSELL  YNFLTQPDEF  TLPNGEIILA  KMIKVVPRRL  RIEKGQYLDP1080
FLISLINYAE  PAKPKATQPS  PIFTDIIEAK  LQNTMFGNNA  NITESIAEFT  TEKSTNEEHE1140
SAYDHLIVIA  KQVFSASPLL  IYILDLLRVP  LNNSFNSFFS  HFVDETVDEI  LADEENILDV1200
IHALRDTIFP  NDAEKKGPTD  HVNFDDVVAA  AEEYLPKPIK  LVLGKSNIQN  GLQMILRYFQ1260
DPLLNKQLFY  MILDEILLQI  FPELQAHSEK  LNTHKCSINS  NRMAHLSILL  SFFFISFASC1320
QQCEQSSDVA  RFDCYPENGA  SQEKCLARNC  CWREPTEKLN  HISKHPSAFR  DVNVPYCYYP1380
KDFPTYVLQT  NEQTDFGQRL  RINKSQTTYM  PHDIIDLTVD  LIYETAQRFR  IRIYDTVYNR1440
YEVPLEVPKI  EKKVNQTDYD  VKINSNPFSL  LVTRKTTGVI  LFDSSVSPLI  FADQFIKFST1500
RLSSPLVYGL  GEHRQGFVIN  ITNQWKKLTF  WSRDFPPVQN  INLYGVHPFH  INPEFTSDES1560
TSFHGQFFLN  SNAMDIDLQP  LPALTYTTIG  GIIDLYVFSG  PTVQNVIEQY  WDVIGKPMMP1620
PHWSLGFHLC  RYGYNSIDNM  IATIKRMDAA  DFPYDVQWTD  IDTMSSYLDF  TYDEKNFRGL1680
PDLVRTIQAS  GKRYVNIIDP  GISSIQPAGT  YVPYEDGLKK  NIFMKKYNSS  EIILGKVWPG1740
ITAFPDFTNP  NATDWWTNIA  SAFHDIVPFD  GMWIDMNEPS  SFLDGSSDGC  TTNYLDNPPF1800
VPNVLGANLN  SKSLCPSAQQ  YLSLHYNLHS  MFGYFEAKAS  NAAMKTIRKK  RPFILSRSTF1860
AGSGKFTAHW  TGDNRATFDD  MYFSIPAILN  FNMFGVTHVG  ADICGFGLET  TEELCTRWMQ1920
LGAFYPFMRN  HNDLGQKDQD  PASFSYQAQQ  SMKQALLMRY  SLVPFWYTLH  YEATVISRTI1980
VQPLFFEFPD  DLNTYNIDQQ  FLIGRAILVS  PNLKIGATSV  YAYFPSDTWY  EFPSGTKFEI2040
VGSFTTLDAP  LSKINVHVRA  GFIIPMQIPG  DNLIIGRDNP  FTLLVAQSQW  GNASGNLFWD2100
DGDSIDSIET  KTYNYLEFSL  TNAATLTINA  LVTNYKDSPM  RLELIKILGV  NKSVINVNVN2160
GKLYPNFLYN  LYDQILLIYG  LDLNMIDEPV  QTIQWTMTN2199

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help