CAZyme3D

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Entry ID

Information for CAZyme ID: UJO22617.1

Basic Information

GenBank IDUJO22617.1
FamilyGT20
Sequence Length953
UniProt IDA0A9Q8UUB6(100,100)Download
Average pLDDT?82.04
CAZy50 ID16508
CAZy50 RepYes, UJO22617.1
Structure ClusterSC_GT20_clus8
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID5499
KingdomEukaryota
PhylumAscomycota
ClassDothideomycetes
OrderMycosphaerellales
FamilyMycosphaerellaceae
GenusFulvia
SpeciesFulvia fulva

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MATNLTVSLF  LPNTISFHEE  VEAPSRRRSP  PFQLEQRGSS  TVDLPTRHST  ASLFNARTNG60
LGGGHTPPLT  PAIQSALNED  FFTPGIDAKK  RHFAKPGDPR  SMLRSDTHAE  WGQTDAVFNQ120
PRSRAGPLPS  ASIQDFAKVY  DEMKEREERR  RKKQGRRVTK  ASPGQSKFNP  RGPSSERGFD180
GKTWTVEPAI  HGNGGLVNAH  RETSGDRADD  STDTTWIGTL  GFPTDALPQD  IKDEVRDKLI240
NDYHSEVVYC  NDKDIDGHYA  HYCKTILWPI  FHYQVPDHPK  SKAYADHSWE  FYRNVNRAFA300
DKVIESYKRG  DTIWVHDYHL  LLVPGMVREK  LPDAKIGFFL  HTAFPSSEVF  RCLSTRKELL360
EGVLGANLIS  FQTEEYASHF  LQTCSRILAV  ETTAEGVQID  DHFVNVTHEA  IGINPFMFME420
AREDEEVQEW  VQTIAEKYKD  KVIIVARDKL  DHVHGVRQKL  LAYELFLNRH  PEWREKVVMI480
QVATSTNEQT  ELLTTVSDIC  TRIDSVHSTL  AHQPLVFLKQ  DIGFAQYIAL  LTVADVLMIS540
ALRDGMNLTA  HEYIACQDGK  GFQKMHGPLI  LSEFTGSAAV  LGDGAILINP  WDYQGQADAI600
KQAIEMGNEE  RKSRWEKLHA  VVEERTGGFW  SQRLSKELDR  AFEEHHARAS  ASVPRLSVSQ660
LTEKYKAAET  RLFIIDYEGT  LAPHKTASGI  PLGSPARVVE  ALNDLITDAR  NIVYVMSGRK720
PEELENHFRT  LPKAGLIAEN  GCFVREYGID  NNEWTSFVDL  KEVANWREQV  KGILGYYEER780
VEGSYLEERH  CSILLRYEKA  GDQEAALRQA  AECADQINDS  CRGLDIHAVP  IKQAILIEQQ840
NLTKGTAAKH  VFELIERQSK  GLQKPDFMMV  AGDDREDEVI  FKWANALGKE  GVVKDVYTVT900
VGKRNTLAQA  TLTQGSTGLL  TVLAKLNKIS  ADMLPRDYFN  SQPNPKRVNT  FPK953

Predicted 3D structure by AlphaFold2 with pLDDT = 82.04 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MATNLTVSLF  LPNTISFHEE  VEAPSRRRSP  PFQLEQRGSS  TVDLPTRHST  ASLFNARTNG60
LGGGHTPPLT  PAIQSALNED  FFTPGIDAKK  RHFAKPGDPR  SMLRSDTHAE  WGQTDAVFNQ120
PRSRAGPLPS  ASIQDFAKVY  DEMKEREERR  RKKQGRRVTK  ASPGQSKFNP  RGPSSERGFD180
GKTWTVEPAI  HGNGGLVNAH  RETSGDRADD  STDTTWIGTL  GFPTDALPQD  IKDEVRDKLI240
NDYHSEVVYC  NDKDIDGHYA  HYCKTILWPI  FHYQVPDHPK  SKAYADHSWE  FYRNVNRAFA300
DKVIESYKRG  DTIWVHDYHL  LLVPGMVREK  LPDAKIGFFL  HTAFPSSEVF  RCLSTRKELL360
EGVLGANLIS  FQTEEYASHF  LQTCSRILAV  ETTAEGVQID  DHFVNVTHEA  IGINPFMFME420
AREDEEVQEW  VQTIAEKYKD  KVIIVARDKL  DHVHGVRQKL  LAYELFLNRH  PEWREKVVMI480
QVATSTNEQT  ELLTTVSDIC  TRIDSVHSTL  AHQPLVFLKQ  DIGFAQYIAL  LTVADVLMIS540
ALRDGMNLTA  HEYIACQDGK  GFQKMHGPLI  LSEFTGSAAV  LGDGAILINP  WDYQGQADAI600
KQAIEMGNEE  RKSRWEKLHA  VVEERTGGFW  SQRLSKELDR  AFEEHHARAS  ASVPRLSVSQ660
LTEKYKAAET  RLFIIDYEGT  LAPHKTASGI  PLGSPARVVE  ALNDLITDAR  NIVYVMSGRK720
PEELENHFRT  LPKAGLIAEN  GCFVREYGID  NNEWTSFVDL  KEVANWREQV  KGILGYYEER780
VEGSYLEERH  CSILLRYEKA  GDQEAALRQA  AECADQINDS  CRGLDIHAVP  IKQAILIEQQ840
NLTKGTAAKH  VFELIERQSK  GLQKPDFMMV  AGDDREDEVI  FKWANALGKE  GVVKDVYTVT900
VGKRNTLAQA  TLTQGSTGLL  TVLAKLNKIS  ADMLPRDYFN  SQPNPKRVNT  FPK953

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT20(184-640)

MATNLTVSLF  LPNTISFHEE  VEAPSRRRSP  PFQLEQRGSS  TVDLPTRHST  ASLFNARTNG60
LGGGHTPPLT  PAIQSALNED  FFTPGIDAKK  RHFAKPGDPR  SMLRSDTHAE  WGQTDAVFNQ120
PRSRAGPLPS  ASIQDFAKVY  DEMKEREERR  RKKQGRRVTK  ASPGQSKFNP  RGPSSERGFD180
GKTWTVEPAI  HGNGGLVNAH  RETSGDRADD  STDTTWIGTL  GFPTDALPQD  IKDEVRDKLI240
NDYHSEVVYC  NDKDIDGHYA  HYCKTILWPI  FHYQVPDHPK  SKAYADHSWE  FYRNVNRAFA300
DKVIESYKRG  DTIWVHDYHL  LLVPGMVREK  LPDAKIGFFL  HTAFPSSEVF  RCLSTRKELL360
EGVLGANLIS  FQTEEYASHF  LQTCSRILAV  ETTAEGVQID  DHFVNVTHEA  IGINPFMFME420
AREDEEVQEW  VQTIAEKYKD  KVIIVARDKL  DHVHGVRQKL  LAYELFLNRH  PEWREKVVMI480
QVATSTNEQT  ELLTTVSDIC  TRIDSVHSTL  AHQPLVFLKQ  DIGFAQYIAL  LTVADVLMIS540
ALRDGMNLTA  HEYIACQDGK  GFQKMHGPLI  LSEFTGSAAV  LGDGAILINP  WDYQGQADAI600
KQAIEMGNEE  RKSRWEKLHA  VVEERTGGFW  SQRLSKELDR  AFEEHHARAS  ASVPRLSVSQ660
LTEKYKAAET  RLFIIDYEGT  LAPHKTASGI  PLGSPARVVE  ALNDLITDAR  NIVYVMSGRK720
PEELENHFRT  LPKAGLIAEN  GCFVREYGID  NNEWTSFVDL  KEVANWREQV  KGILGYYEER780
VEGSYLEERH  CSILLRYEKA  GDQEAALRQA  AECADQINDS  CRGLDIHAVP  IKQAILIEQQ840
NLTKGTAAKH  VFELIERQSK  GLQKPDFMMV  AGDDREDEVI  FKWANALGKE  GVVKDVYTVT900
VGKRNTLAQA  TLTQGSTGLL  TVLAKLNKIS  ADMLPRDYFN  SQPNPKRVNT  FPK953

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help