Information for CAZyme ID: UJF31417.1
Basic Information
| GenBank ID | UJF31417.1 |
| Family | GH43_22 |
| Sequence Length | 1088 |
| UniProt ID | UJF31417.1(MOD) |
| Average pLDDT? | 88.08 |
| CAZy50 ID | 10837 |
| CAZy50 Rep | Yes, UJF31417.1 |
| Structure Cluster | SC_GH43_clus193 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2908839 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Bacillales |
| Family | Paenibacillaceae |
| Genus | Paenibacillus |
| Species | Paenibacillus sp. YPD9-1 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MSELQMIRDG FSYTRTRKSL GHKVCSVLLS SALIAGVFAV GEGGKAYAAD TPSAPQNGLI | 60 |
| ADYSFAQTPQ DGKTIANLAT NAGAVGSAVV QNESTAKWED SALVFSGVGT SVSSPTGTWV | 120 |
| SLPNDILSGK TSATVNIEVK PSASIITKNH FLWSIGNTGT NTYWFTNTLA PRTSIKYGGS | 180 |
| EKTAQSSSAL KADRWYSLTS VIDAETKMIS FYVDGVKVGE KQDSGMSLAQ VADQSRNTIG | 240 |
| RAPYNDVLFQ GSVASFRIYD RALGADEVNQ ISEVDAKLHE SSIEQAVQEA VNNVQDVTIS | 300 |
| DSTVTLPSYN GTVKWTSKTP AVHIMEDGVT ATALQPAAGE SPLTGTLTAT MTSRGVSVFK | 360 |
| DVNVTVNAVP TAADPYGYLM VHFIEDSGGY AEKIYLDVSR GDNPEQWDPL NGGKPILASN | 420 |
| MGTTGVRDPY LTYNPETKTY YMIATDLRVF GGDGAGWGVW QKSYSTKVNV WESKDLITWS | 480 |
| DMRQFDVARD KEGNKVAELG MMWAPEATWV PDYYGEGKGA FIMYWSSQLY ANDDPNHDNA | 540 |
| TYSRVMWGAT TDFTQSTFQY GGVFVDFNGN TIDTTMIQNN GKTYRITKDN SRGNAIYMES | 600 |
| TDAKQWWKPE TVWSTIQTKI GSAYGSVEGP AVFKSHSEDK WYLYVDVIPS TGYRPMVTTN | 660 |
| LDNGWTQLNS AGFYMAPSTK HGGVISLTKA QYDAIRNADA ASAISQDLGD TEIAQGTSSE | 720 |
| GLAAALPKTA SVNLAYQRGS SQLPVTWDTS EVDLNTVGTY SITGRVQSIG ANLNQWVGKD | 780 |
| GLTSYLAEDK ELYSSTAITV TGSVTVKEST SGADAFLQGA DTVKAGQTFD LTYHLNPQEA | 840 |
| EAMAQDVTIS YNADLLEFAG ADSMNDNFQI LAVSDPLTTP GQVRIIAAQV GEPVTDSGDL | 900 |
| IKLHWKAKSP AADAVATTTI SLSKVIVADR SGTETELSGD SHSVQVQVMD SSQILALIAE | 960 |
| AQSKHDAAVE GNQAGQYPAG SKAKLQSAID SAKAVAEDAN ATQQQLDAAK SALSSALQEF | 1020 |
| TATVITRNPG DVNSDNKISI GDLAIIAHAY GKTSNDTDWN DYKASDLNGD GIVDIEDLSA | 1080 |
| MARLIVSE | 1088 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.08 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MSELQMIRDG FSYTRTRKSL GHKVCSVLLS SALIAGVFAV GEGGKAYAAD TPSAPQNGLI | 60 |
| ADYSFAQTPQ DGKTIANLAT NAGAVGSAVV QNESTAKWED SALVFSGVGT SVSSPTGTWV | 120 |
| SLPNDILSGK TSATVNIEVK PSASIITKNH FLWSIGNTGT NTYWFTNTLA PRTSIKYGGS | 180 |
| EKTAQSSSAL KADRWYSLTS VIDAETKMIS FYVDGVKVGE KQDSGMSLAQ VADQSRNTIG | 240 |
| RAPYNDVLFQ GSVASFRIYD RALGADEVNQ ISEVDAKLHE SSIEQAVQEA VNNVQDVTIS | 300 |
| DSTVTLPSYN GTVKWTSKTP AVHIMEDGVT ATALQPAAGE SPLTGTLTAT MTSRGVSVFK | 360 |
| DVNVTVNAVP TAADPYGYLM VHFIEDSGGY AEKIYLDVSR GDNPEQWDPL NGGKPILASN | 420 |
| MGTTGVRDPY LTYNPETKTY YMIATDLRVF GGDGAGWGVW QKSYSTKVNV WESKDLITWS | 480 |
| DMRQFDVARD KEGNKVAELG MMWAPEATWV PDYYGEGKGA FIMYWSSQLY ANDDPNHDNA | 540 |
| TYSRVMWGAT TDFTQSTFQY GGVFVDFNGN TIDTTMIQNN GKTYRITKDN SRGNAIYMES | 600 |
| TDAKQWWKPE TVWSTIQTKI GSAYGSVEGP AVFKSHSEDK WYLYVDVIPS TGYRPMVTTN | 660 |
| LDNGWTQLNS AGFYMAPSTK HGGVISLTKA QYDAIRNADA ASAISQDLGD TEIAQGTSSE | 720 |
| GLAAALPKTA SVNLAYQRGS SQLPVTWDTS EVDLNTVGTY SITGRVQSIG ANLNQWVGKD | 780 |
| GLTSYLAEDK ELYSSTAITV TGSVTVKEST SGADAFLQGA DTVKAGQTFD LTYHLNPQEA | 840 |
| EAMAQDVTIS YNADLLEFAG ADSMNDNFQI LAVSDPLTTP GQVRIIAAQV GEPVTDSGDL | 900 |
| IKLHWKAKSP AADAVATTTI SLSKVIVADR SGTETELSGD SHSVQVQVMD SSQILALIAE | 960 |
| AQSKHDAAVE GNQAGQYPAG SKAKLQSAID SAKAVAEDAN ATQQQLDAAK SALSSALQEF | 1020 |
| TATVITRNPG DVNSDNKISI GDLAIIAHAY GKTSNDTDWN DYKASDLNGD GIVDIEDLSA | 1080 |
| MARLIVSE | 1088 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.