Information for CAZyme ID: SNY98263.1
Basic Information
| GenBank ID | SNY98263.1 |
| Family | CBM35, CBM6 |
| Sequence Length | 5006 |
| UniProt ID | A0A7Z7MZ20(100,100) |
| Average pLDDT? | 0.00 |
| CAZy50 ID | 55 |
| CAZy50 Rep | Yes, SNY98263.1 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1761789 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Halomonadaceae |
| Genus | Halomonas |
| Species | Halomonas sp. hl-4 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
Predicted 3D structure by AlphaFold2 with pLDDT = 0.00 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM35(188-305)+CBM6(336-489)+CBM35(536-653)+CBM35(1638-1748)+CBM35(1897-1999)+CBM35(2068-2175)+CBM35(3116-3222)+CBM35(3236-3360)+CBM6(4219-4354)+CBM6(4386-4523)+CBM6(4649-4788)+CBM6(4816-4952)
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.