Information for CAZyme ID: SET95995.1
Basic Information
GenBank ID | SET95995.1 |
Family | GT99 |
Sequence Length | 558 |
UniProt ID | SET95995.1(MOD)![]() |
Average pLDDT? | 84.98 |
CAZy50 ID | 58289 |
CAZy50 Rep | Yes, SET95995.1 |
Structure Cluster | SC_GT99_clus8 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1297793 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Clostridia |
Order | Lachnospirales |
Family | Lachnospiraceae |
Genus | Lacrimispora |
Species | Lacrimispora sphenoides |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MFVPIIITLD PAGETPWLWV FHKMASMGKG YKWPIVAQKE YFAKYKTFEV PSIWKEWFDV | 60 |
PLDKEGVLEN IIPIKIPEYI INSYIEKYPS QTDAYVNSFV EEWSEIVEYL YKRLNQIVVD | 120 |
EGKSIEGLIL FRYYRCFESL AKKLNVPTFY FELGLRVPDY RNTFYWSKSG LQGKAGFDER | 180 |
YTKFHKEFMV NPVLALDAKE ILALFLKEDK LDYLRMNMSK EYEFGIFGGY SIPMASTAFN | 240 |
QVTLAEELML VRKWCSDDKI IIKKHPGDPL DAAPRFPNIE KGENTSAQFI QKCRRIVCAG | 300 |
SNTAFEAALY GVPAYDLGWS QYSFISNLSL KELTDNLPDK LKLSFVAFGC LAPLELLKDI | 360 |
DYIRKVIMLD SELEIYKLNL EYYLRDYGLT YEQLAEADNR LELILKSRLH KPYEHLKLIP | 420 |
RGDLTPLAEL QIELKDVQRQ LTCLLEKEGE QTQISSKLDE EFECIKKRNS RLESELLQIK | 480 |
EKYRILENEN SILQVSNKNS LNDLNVLNDL ISELKMKLQD MEQLCSEKDA LYHQILESTS | 540 |
YRCTKPLRVF ADLFKNIV | 558 |
Predicted 3D structure by AlphaFold2 with pLDDT = 84.98 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MFVPIIITLD PAGETPWLWV FHKMASMGKG YKWPIVAQKE YFAKYKTFEV PSIWKEWFDV | 60 |
PLDKEGVLEN IIPIKIPEYI INSYIEKYPS QTDAYVNSFV EEWSEIVEYL YKRLNQIVVD | 120 |
EGKSIEGLIL FRYYRCFESL AKKLNVPTFY FELGLRVPDY RNTFYWSKSG LQGKAGFDER | 180 |
YTKFHKEFMV NPVLALDAKE ILALFLKEDK LDYLRMNMSK EYEFGIFGGY SIPMASTAFN | 240 |
QVTLAEELML VRKWCSDDKI IIKKHPGDPL DAAPRFPNIE KGENTSAQFI QKCRRIVCAG | 300 |
SNTAFEAALY GVPAYDLGWS QYSFISNLSL KELTDNLPDK LKLSFVAFGC LAPLELLKDI | 360 |
DYIRKVIMLD SELEIYKLNL EYYLRDYGLT YEQLAEADNR LELILKSRLH KPYEHLKLIP | 420 |
RGDLTPLAEL QIELKDVQRQ LTCLLEKEGE QTQISSKLDE EFECIKKRNS RLESELLQIK | 480 |
EKYRILENEN SILQVSNKNS LNDLNVLNDL ISELKMKLQD MEQLCSEKDA LYHQILESTS | 540 |
YRCTKPLRVF ADLFKNIV | 558 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.