Information for CAZyme ID: SDU14417.1
Basic Information
GenBank ID | SDU14417.1 |
Family | GH163 |
Sequence Length | 726 |
UniProt ID | A0A1H2G4C1(100,100)![]() |
Average pLDDT? | 92.32 |
CAZy50 ID | 35537 |
CAZy50 Rep | Yes, SDU14417.1 |
Structure Cluster | SC_GH163_clus14 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1336804 |
Kingdom | Bacteria |
Phylum | Bacteroidota |
Class | Flavobacteriia |
Order | Flavobacteriales |
Family | Flavobacteriaceae |
Genus | Polaribacter |
Species | Polaribacter sp. Hel1_33_78 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MNLKKYISIG MFFLSLFSCA QKNVILYSQK QKIYPKINIP LSADILVSNA ANEFNNNFRS | 60 |
ITGQYLNIER SNNLNKNYTY IILRVNPPQK ESYCLYKKDR NITIQATTPA NLVFGLNAFF | 120 |
KKYTSLNFKE KNKKGKENKG RIELSIPNRF SSCSSPDFEY REPYFSPNFN PDFRAWNKTN | 180 |
YLELEWGIWG HNISKIVKEY NLPQSIYAKV GKRRVESQYC FTSDSLFKYI NEKVKIIYDS | 240 |
DHALDKYMIL PNDNSIVCTC ASCKAVGNTT KDAAPAVFTF LNKLAKNHKK SSFFTASYFT | 300 |
VKKIPQFKAE KNVGLFYSTI DIQKGIPIED TQYIENFEEA IKRWKNYLEK IYIWDYAVNF | 360 |
DNYFDIYPSL KVTQKNLKLY KKLGVKGVFL HGSEYQYSTF QDLKSNIFSK LLWNTDINVD | 420 |
QAIYTYFHEK FPNKLASALT DYYSFITDSF FINKEELAIY SGINKTVKKY LNPKVFFSFY | 480 |
DEFDSNTERN KYDIDFRKIA TALTFLKLEV MRVYGIGTYG FATINNNEEI IVKNEAGIML | 540 |
DKLKSFSKSV NIKTYNELKY PIDDYIKSWK ETIYKYHKRK HYFYKKPFEI LSNLDEDYTN | 600 |
ISVLNNGTFG FKDYNTNWHI CSIDNLTLKI EKKHIKGSKK ITFSFLQDTK HAIYYPSVIE | 660 |
ILDTNYNLIK KLNPLVDKTD LATKEMSINL PSKFDDEQLP DTFIVKISRS NVAGKNALAC | 720 |
DEIIFN | 726 |
Predicted 3D structure by AlphaFold2 with pLDDT = 92.32 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MNLKKYISIG MFFLSLFSCA QKNVILYSQK QKIYPKINIP LSADILVSNA ANEFNNNFRS | 60 |
ITGQYLNIER SNNLNKNYTY IILRVNPPQK ESYCLYKKDR NITIQATTPA NLVFGLNAFF | 120 |
KKYTSLNFKE KNKKGKENKG RIELSIPNRF SSCSSPDFEY REPYFSPNFN PDFRAWNKTN | 180 |
YLELEWGIWG HNISKIVKEY NLPQSIYAKV GKRRVESQYC FTSDSLFKYI NEKVKIIYDS | 240 |
DHALDKYMIL PNDNSIVCTC ASCKAVGNTT KDAAPAVFTF LNKLAKNHKK SSFFTASYFT | 300 |
VKKIPQFKAE KNVGLFYSTI DIQKGIPIED TQYIENFEEA IKRWKNYLEK IYIWDYAVNF | 360 |
DNYFDIYPSL KVTQKNLKLY KKLGVKGVFL HGSEYQYSTF QDLKSNIFSK LLWNTDINVD | 420 |
QAIYTYFHEK FPNKLASALT DYYSFITDSF FINKEELAIY SGINKTVKKY LNPKVFFSFY | 480 |
DEFDSNTERN KYDIDFRKIA TALTFLKLEV MRVYGIGTYG FATINNNEEI IVKNEAGIML | 540 |
DKLKSFSKSV NIKTYNELKY PIDDYIKSWK ETIYKYHKRK HYFYKKPFEI LSNLDEDYTN | 600 |
ISVLNNGTFG FKDYNTNWHI CSIDNLTLKI EKKHIKGSKK ITFSFLQDTK HAIYYPSVIE | 660 |
ILDTNYNLIK KLNPLVDKTD LATKEMSINL PSKFDDEQLP DTFIVKISRS NVAGKNALAC | 720 |
DEIIFN | 726 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.