Information for CAZyme ID: SDS27703.1
Basic Information
GenBank ID | SDS27703.1 |
Family | GT101 |
Sequence Length | 733 |
UniProt ID | A0A1H1QWG3(100,100)![]() |
Average pLDDT? | 83.23 |
CAZy50 ID | 34708 |
CAZy50 Rep | Yes, SDS27703.1 |
Structure Cluster | SC_GT101_clus25 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 545619 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Micrococcales |
Family | Cellulomonadaceae |
Genus | Paraoerskovia |
Species | Paraoerskovia marina |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MPLVEQEISD FTHELQRNIV RQLGHHSVNV DRDGWLTARI KPGHSVQMKF AALGDQVGLL | 60 |
VRGSSPEASR AVRNALVGKA RDAGDIASNA HLIDDFDTGT LRARRSRSEA IRKSMRWFLW | 120 |
ISDATTRTPV DAKRGPALKG SERAVYWWDE RPNFGDAVGP WLVQAMSGHE PVNARRRKEL | 180 |
SPVLWAVGST IGYLDRNNVD IWGSGLMEPL QGSKLDALRK LENVRVHAVR GTETRSELVS | 240 |
KLGWEVPEVY GDPALLLPRF YTAKPAAQSG RIAVVPHYVH VKHLPSSLGD GSVVVDVASD | 300 |
LESVVDTIAQ ADVCISTSLH GIIIAQAYGV PWIWLRVVDH PLGGDAFKFR DFFSTIDDSQ | 360 |
ASTVAVKASE LGTLDIESLA SRATLPSLTI ALDSLESAFP FARGEGFEAE SDLPPLPTPL | 420 |
AQLSRRARRR ASHVKSRLVP KREADLLQPE LIKALSTVAS ELKQSNRNTQ RLLAEVGKQN | 480 |
RTMEAIRLES TSGVMTAVRE FVNERQLTMI ETLEHLVESE NSFSRFGDGE FRLMLRSDFN | 540 |
LRFQSNSRPL QSELLATFRD AGRDRFDVGF PQIFGDAHWS GVWSELWPEL KSNVPETGAF | 600 |
LNSHVTRPTV FEQYGDRAVD LWREVWRDRD IVFVTGAGSR FAATPALFSS ARSTRTVSSL | 660 |
PVGAYDDLDR LVEELSEVGE GALVLLALGP AGTVLARRLA LIGIRALDIG HISDSYHNVF | 720 |
SGGPRPESRP IRS | 733 |
Predicted 3D structure by AlphaFold2 with pLDDT = 83.23 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MPLVEQEISD FTHELQRNIV RQLGHHSVNV DRDGWLTARI KPGHSVQMKF AALGDQVGLL | 60 |
VRGSSPEASR AVRNALVGKA RDAGDIASNA HLIDDFDTGT LRARRSRSEA IRKSMRWFLW | 120 |
ISDATTRTPV DAKRGPALKG SERAVYWWDE RPNFGDAVGP WLVQAMSGHE PVNARRRKEL | 180 |
SPVLWAVGST IGYLDRNNVD IWGSGLMEPL QGSKLDALRK LENVRVHAVR GTETRSELVS | 240 |
KLGWEVPEVY GDPALLLPRF YTAKPAAQSG RIAVVPHYVH VKHLPSSLGD GSVVVDVASD | 300 |
LESVVDTIAQ ADVCISTSLH GIIIAQAYGV PWIWLRVVDH PLGGDAFKFR DFFSTIDDSQ | 360 |
ASTVAVKASE LGTLDIESLA SRATLPSLTI ALDSLESAFP FARGEGFEAE SDLPPLPTPL | 420 |
AQLSRRARRR ASHVKSRLVP KREADLLQPE LIKALSTVAS ELKQSNRNTQ RLLAEVGKQN | 480 |
RTMEAIRLES TSGVMTAVRE FVNERQLTMI ETLEHLVESE NSFSRFGDGE FRLMLRSDFN | 540 |
LRFQSNSRPL QSELLATFRD AGRDRFDVGF PQIFGDAHWS GVWSELWPEL KSNVPETGAF | 600 |
LNSHVTRPTV FEQYGDRAVD LWREVWRDRD IVFVTGAGSR FAATPALFSS ARSTRTVSSL | 660 |
PVGAYDDLDR LVEELSEVGE GALVLLALGP AGTVLARRLA LIGIRALDIG HISDSYHNVF | 720 |
SGGPRPESRP IRS | 733 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.