Information for CAZyme ID: SDS20123.1
Basic Information
GenBank ID | SDS20123.1 |
Family | CBM38, GH116 |
Sequence Length | 1249 |
UniProt ID | A0A1H1Q9Y9(100,100)![]() |
Average pLDDT? | 88.06 |
CAZy50 ID | 6956 |
CAZy50 Rep | Yes, SDS20123.1 |
Structure Cluster | SC_CBM38_clus1, SC_GH116_clus11 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 630515 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Propionibacteriales |
Family | Propionibacteriaceae |
Genus | Microlunatus |
Species | Microlunatus soli |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MEQRRSQLTI AEVTGSDSGS VTCCSSDPTC CSPASEAGPQ DTAAPTIGRR GFLGLSAVAA | 60 |
AGAGLLLPAD AVAVSPDKGI DPDQLRALRR GGEPTRYRGE ALTRIGMPVG GATCGQVYLS | 120 |
GDGRLWLWDV LHPDAPDYGG TDWTGVHYTD PIDLDAPFRT GFAIRITDAD GGRSVPLDGI | 180 |
GFDQTSFVGR YPVGEIALRS STLPISVDLQ SFSPFIPGDL DSSSLPVTIM EYTLHNDSGR | 240 |
PVHCRIAGLA ENPVCLRSRT SQPVTLAADT MHSGGVDGVQ FTATPEPVDD PLPGDVIFED | 300 |
WSGEDFAGWT VSGTAFGDGP VDISDLPASM LRFGPLGSTG DRLVSSYPAH SDAATGSLTS | 360 |
APFTIEHETI STRIGGGRRG VSIAVLIDDH PVATASGWST EPLRPVLLDV SGHRGKTARI | 420 |
KISDDNDVAW GHLTVDRILF TDRPAPEPDR VLADWESGNY DGWTSTGDAF GAGPVPRSPL | 480 |
PDYFPAPDAM NTEGNFFVSS HDFRNHDDAG AADKVTGTLI GEPFTIDRRY LAAQIGGGAD | 540 |
ANTVGLRLVV DDTVVARLAG SNDEAFTPLA VDVSAYHGST GHLEIVDDNS GGWGHVNVDA | 600 |
IWLTDLPLRI IEADQLTDNG SFAIGVINPG RELDVRVTPS AERWQQIDDQ LDPRPGDTDG | 660 |
GRQAGVLTVD VSLPPHGSRT VRFAYGWRFP TPNRRLFGFL EDFDQLSHHY AARFDDAAAA | 720 |
LDRLATDWDR LTDTTRTFVR TWYQDSTLPQ WLLERTLAPA STVATETAQR FSNGRFYAWE | 780 |
GTYCCAGTCT HVWNYAQSIG YLFGELERDA RSRTDFGSAF HPDGSIDYRG EADRRVAHDG | 840 |
QCGNILRTYR EHQLTSDNDF LTPIWPRVKK AMQYLIAFDR SATEGTEGIL EGAQYNTLDA | 900 |
TWYGEIPWIS GLYVAALRAC AEMADDMADA DFADGCRRLA DSGSAYLHDH LWNDRYRYFE | 960 |
QRVDPDHADA INSNRGCYLD QMFGQTYAHQ LGLPRVFERS RSLTALKSLY RNNFMSDPPS | 1020 |
YAETSGIPGG RAFAEQRDSG TLVCTWPYGG ADTAPGSGEP YAIGYFNEVW TGMEYQFASH | 1080 |
LLSEGMVDEG LIVLHAIHER YRAEYRNPYN EIECSDHYAR AMMAHSAYLA AIGFGYHGSR | 1140 |
GELSFDPKIN PDDFRAAFTV ADGWGTFSQR DNNDYRASIT IRHGRLIGLR RLTLRPAAIE | 1200 |
GGRRAQVRDA EGRPVRSTSR TTDDSRLQIS LARPVTLQAG ETLKINYRS | 1249 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.06 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MEQRRSQLTI AEVTGSDSGS VTCCSSDPTC CSPASEAGPQ DTAAPTIGRR GFLGLSAVAA | 60 |
AGAGLLLPAD AVAVSPDKGI DPDQLRALRR GGEPTRYRGE ALTRIGMPVG GATCGQVYLS | 120 |
GDGRLWLWDV LHPDAPDYGG TDWTGVHYTD PIDLDAPFRT GFAIRITDAD GGRSVPLDGI | 180 |
GFDQTSFVGR YPVGEIALRS STLPISVDLQ SFSPFIPGDL DSSSLPVTIM EYTLHNDSGR | 240 |
PVHCRIAGLA ENPVCLRSRT SQPVTLAADT MHSGGVDGVQ FTATPEPVDD PLPGDVIFED | 300 |
WSGEDFAGWT VSGTAFGDGP VDISDLPASM LRFGPLGSTG DRLVSSYPAH SDAATGSLTS | 360 |
APFTIEHETI STRIGGGRRG VSIAVLIDDH PVATASGWST EPLRPVLLDV SGHRGKTARI | 420 |
KISDDNDVAW GHLTVDRILF TDRPAPEPDR VLADWESGNY DGWTSTGDAF GAGPVPRSPL | 480 |
PDYFPAPDAM NTEGNFFVSS HDFRNHDDAG AADKVTGTLI GEPFTIDRRY LAAQIGGGAD | 540 |
ANTVGLRLVV DDTVVARLAG SNDEAFTPLA VDVSAYHGST GHLEIVDDNS GGWGHVNVDA | 600 |
IWLTDLPLRI IEADQLTDNG SFAIGVINPG RELDVRVTPS AERWQQIDDQ LDPRPGDTDG | 660 |
GRQAGVLTVD VSLPPHGSRT VRFAYGWRFP TPNRRLFGFL EDFDQLSHHY AARFDDAAAA | 720 |
LDRLATDWDR LTDTTRTFVR TWYQDSTLPQ WLLERTLAPA STVATETAQR FSNGRFYAWE | 780 |
GTYCCAGTCT HVWNYAQSIG YLFGELERDA RSRTDFGSAF HPDGSIDYRG EADRRVAHDG | 840 |
QCGNILRTYR EHQLTSDNDF LTPIWPRVKK AMQYLIAFDR SATEGTEGIL EGAQYNTLDA | 900 |
TWYGEIPWIS GLYVAALRAC AEMADDMADA DFADGCRRLA DSGSAYLHDH LWNDRYRYFE | 960 |
QRVDPDHADA INSNRGCYLD QMFGQTYAHQ LGLPRVFERS RSLTALKSLY RNNFMSDPPS | 1020 |
YAETSGIPGG RAFAEQRDSG TLVCTWPYGG ADTAPGSGEP YAIGYFNEVW TGMEYQFASH | 1080 |
LLSEGMVDEG LIVLHAIHER YRAEYRNPYN EIECSDHYAR AMMAHSAYLA AIGFGYHGSR | 1140 |
GELSFDPKIN PDDFRAAFTV ADGWGTFSQR DNNDYRASIT IRHGRLIGLR RLTLRPAAIE | 1200 |
GGRRAQVRDA EGRPVRSTSR TTDDSRLQIS LARPVTLQAG ETLKINYRS | 1249 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.