Information for CAZyme ID: SAM85626.1
Basic Information
GenBank ID | SAM85626.1 |
Family | GH5_9 |
Sequence Length | 907 |
UniProt ID | A0A1K0GC43(100,100)![]() |
Average pLDDT? | 72.11 |
CAZy50 ID | 18934 |
CAZy50 Rep | Yes, SAM85626.1 |
Structure Cluster | SC_GH5_clus2 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 307758 |
Kingdom | Eukaryota |
Phylum | Basidiomycota |
Class | Ustilaginomycetes |
Order | Ustilaginales |
Family | Ustilaginaceae |
Genus | Ustilago |
Species | Ustilago bromivora |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MVGRRPSTPS RARLPESYEL PASPRQPAIQ EPLLNADNSF ATADPDCTSG SLPPLPSQAP | 60 |
RWSRSNSRYS NLDPSLDSNL DPTISSSAPA YNYDHSYNYD HSYNHYRSSS PTAPQAIQER | 120 |
PFTPPFARSA SRPTSLASSH MLSVRSQSDY DSVYQLWRQS GTPSSFRDLA GDDAASGYYD | 180 |
TTRPSSAVDL EKIEQYRSGA YAPNSPPLAQ QPLHKGEAGT KGSKDYRAVG LAKYGRGKDQ | 240 |
QMSTKNKWLI VLAVAAVIAV LTIAIVLPIT QVLLKSDSRS AKAGQGSGSS SGESDQGSNS | 300 |
ASGKQFQLWG TNGSTIDLGN GRSFTYINNF GGRWASQPFN NSAQAQNYTP PLYQEFDFAR | 360 |
NRMLGVNLGG WLVTEPFIVP ALYELYENTS SPAVDEFTLS QKFLQEGGQD SLRAKMTEHY | 420 |
DTFITEEDFA RIAGAGLNWV RLPIGFWALE TYANEPFLEG VAWNYVLKAI QWARKYGLRI | 480 |
NLDLHAVPGS QNAYNHSGRV GFINFLQGLM GKVNGERTIN YIRQITQFIS QPEIRPVVPM | 540 |
FSVINEPYAI SIGQPALQSW YSQIYTTIRN ITGTGAGKGP YITIHDGFLP LSNWQAFLSG | 600 |
GDRMAWDTHP YICFGQQNND PWDTQIMKVC NQFTPLLDNA RSNMGVSMGG EMSLAINDCG | 660 |
LFLNGVGDGS RYDGTYSGPT PGNFPRVGSC QPFDDYENYS AEMKQGLRRF ALTSMDSLQD | 720 |
FFFWTWRIGN SLRTGKPTAP MWSYSLGLEQ GWMPTNPLGE SHGACQAQAS RIGTSVATAT | 780 |
WGRAFQSWQT GRAGSYNPDT GAKPWPPQSI VSANRAVNQL PSYTATKPIT PLATPTLTRT | 840 |
ATLAGEPTAQ PTLGGWFNGD QNSPFYTAIG GCSYPEDQYN LGAFDANGWP CSGGGVKQRR | 900 |
AEPTALP | 907 |
Predicted 3D structure by AlphaFold2 with pLDDT = 72.11 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MVGRRPSTPS RARLPESYEL PASPRQPAIQ EPLLNADNSF ATADPDCTSG SLPPLPSQAP | 60 |
RWSRSNSRYS NLDPSLDSNL DPTISSSAPA YNYDHSYNYD HSYNHYRSSS PTAPQAIQER | 120 |
PFTPPFARSA SRPTSLASSH MLSVRSQSDY DSVYQLWRQS GTPSSFRDLA GDDAASGYYD | 180 |
TTRPSSAVDL EKIEQYRSGA YAPNSPPLAQ QPLHKGEAGT KGSKDYRAVG LAKYGRGKDQ | 240 |
QMSTKNKWLI VLAVAAVIAV LTIAIVLPIT QVLLKSDSRS AKAGQGSGSS SGESDQGSNS | 300 |
ASGKQFQLWG TNGSTIDLGN GRSFTYINNF GGRWASQPFN NSAQAQNYTP PLYQEFDFAR | 360 |
NRMLGVNLGG WLVTEPFIVP ALYELYENTS SPAVDEFTLS QKFLQEGGQD SLRAKMTEHY | 420 |
DTFITEEDFA RIAGAGLNWV RLPIGFWALE TYANEPFLEG VAWNYVLKAI QWARKYGLRI | 480 |
NLDLHAVPGS QNAYNHSGRV GFINFLQGLM GKVNGERTIN YIRQITQFIS QPEIRPVVPM | 540 |
FSVINEPYAI SIGQPALQSW YSQIYTTIRN ITGTGAGKGP YITIHDGFLP LSNWQAFLSG | 600 |
GDRMAWDTHP YICFGQQNND PWDTQIMKVC NQFTPLLDNA RSNMGVSMGG EMSLAINDCG | 660 |
LFLNGVGDGS RYDGTYSGPT PGNFPRVGSC QPFDDYENYS AEMKQGLRRF ALTSMDSLQD | 720 |
FFFWTWRIGN SLRTGKPTAP MWSYSLGLEQ GWMPTNPLGE SHGACQAQAS RIGTSVATAT | 780 |
WGRAFQSWQT GRAGSYNPDT GAKPWPPQSI VSANRAVNQL PSYTATKPIT PLATPTLTRT | 840 |
ATLAGEPTAQ PTLGGWFNGD QNSPFYTAIG GCSYPEDQYN LGAFDANGWP CSGGGVKQRR | 900 |
AEPTALP | 907 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.