Information for CAZyme ID: QYM77798.1
Basic Information
GenBank ID | QYM77798.1 |
Family | CE12, CE8 |
Sequence Length | 807 |
UniProt ID | A0A8F9XIP1(100,100)![]() |
Average pLDDT? | 91.55 |
CAZy50 ID | 26587 |
CAZy50 Rep | Yes, QYM77798.1 |
Structure Cluster | SC_CE12_clus75, SC_CE8_clus68 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2862869 |
Kingdom | Bacteria |
Phylum | Verrucomicrobiota |
Class | Opitutae |
Order | Opitutales |
Family | Opitutaceae |
Genus | Horticoccus |
Species | Horticoccus luteus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRSWLAVFVA CCLLPFGARA TPDAVVATDG SGQYRSVQEA ISTAPLRTDP ATPPWVILVK | 60 |
PGTYHERIYV QRERGHVRIV GEDAATTTIT YDLSTGSPGP DGKPIGTFRT PTVQIDGDGM | 120 |
EWENITIANS AGPVGQALAL RVEGDRVVFR HCRFLGWQDT ILLNRGRQYF ADCYIEGHVD | 180 |
FIFGGATAYF DRCEIHALKD GYLTAASTPK GQTHGFVFAD GKITGAAGVK TYLGRPWRDY | 240 |
AQTVFLRTEM SGVVRAEGWH NWNKPQAEIT TRYAEFGSTG PGANPAGRVP WAKALTAAAA | 300 |
AALTPAEVLR GHDGWNPAGR APIARKVRIV LVGDSTVTDE VGWGRGFKQL LTDATECINT | 360 |
ARGGRSSKSF RAEGHWPPAL ALHGDYYLIQ FGHNDQPGKG PARETDAGTT FLANMARYVD | 420 |
EVRAIGAQPI LVTSLTRRDF DHEGRGKIVS TLTPYVDAVR KVAAEKRVPL VDLYARSVEL | 480 |
CERLGPTESA TFNPIKNGKP DTTHLNAKGT AAFAALVADE LRRVVPELAP FLRAEPATDV | 540 |
LRDIKYGEAD GEPLLLDAHV PVGAGPFPVA ILVHGGGWSR GDKHSVPAGD GADISPWFAP | 600 |
LSAANFTWFS INYRLAPEHR WPACFDDVET AIRWAKAHAA EFKGDPQRMA LFGHSSGGHL | 660 |
VCLAATLAGE DTRVQAIVGF APVTNHEQDL AARGGLSPSL QGLLNLPREV TVGSRAVLRD | 720 |
ISPLNHVHAG LPPFLLLHGE ADKTVPLQQS LDFQAKLRAN GVRCDLLTIP GAPHALETWA | 780 |
QLRPDYEAHY IAWLREVLDA PAERAPQ | 807 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.55 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MRSWLAVFVA CCLLPFGARA TPDAVVATDG SGQYRSVQEA ISTAPLRTDP ATPPWVILVK | 60 |
PGTYHERIYV QRERGHVRIV GEDAATTTIT YDLSTGSPGP DGKPIGTFRT PTVQIDGDGM | 120 |
EWENITIANS AGPVGQALAL RVEGDRVVFR HCRFLGWQDT ILLNRGRQYF ADCYIEGHVD | 180 |
FIFGGATAYF DRCEIHALKD GYLTAASTPK GQTHGFVFAD GKITGAAGVK TYLGRPWRDY | 240 |
AQTVFLRTEM SGVVRAEGWH NWNKPQAEIT TRYAEFGSTG PGANPAGRVP WAKALTAAAA | 300 |
AALTPAEVLR GHDGWNPAGR APIARKVRIV LVGDSTVTDE VGWGRGFKQL LTDATECINT | 360 |
ARGGRSSKSF RAEGHWPPAL ALHGDYYLIQ FGHNDQPGKG PARETDAGTT FLANMARYVD | 420 |
EVRAIGAQPI LVTSLTRRDF DHEGRGKIVS TLTPYVDAVR KVAAEKRVPL VDLYARSVEL | 480 |
CERLGPTESA TFNPIKNGKP DTTHLNAKGT AAFAALVADE LRRVVPELAP FLRAEPATDV | 540 |
LRDIKYGEAD GEPLLLDAHV PVGAGPFPVA ILVHGGGWSR GDKHSVPAGD GADISPWFAP | 600 |
LSAANFTWFS INYRLAPEHR WPACFDDVET AIRWAKAHAA EFKGDPQRMA LFGHSSGGHL | 660 |
VCLAATLAGE DTRVQAIVGF APVTNHEQDL AARGGLSPSL QGLLNLPREV TVGSRAVLRD | 720 |
ISPLNHVHAG LPPFLLLHGE ADKTVPLQQS LDFQAKLRAN GVRCDLLTIP GAPHALETWA | 780 |
QLRPDYEAHY IAWLREVLDA PAERAPQ | 807 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.