Information for CAZyme ID: QYE52146.1
Basic Information
GenBank ID | QYE52146.1 |
Family | CBM1 |
Sequence Length | 2110 |
UniProt ID | QYE52146.1(MOD)![]() |
Average pLDDT? | 55.84 |
CAZy50 ID | 1251 |
CAZy50 Rep | Yes, QYE52146.1 |
Structure Cluster | SC_CBM1_clus109 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 88834 |
Kingdom | Eukaryota |
Phylum | Oomycota |
Class | |
Order | Pythiales |
Family | Pythiaceae |
Genus | Pythium |
Species | Pythium porphyrae |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKLSVVFVGA IHAAWMALAL AASDDAFPMA RVTSADLTET TTPLATETTT PLATETPSPT | 60 |
SPTQETATPT ETSSAPTTPA PVTPIEQCLA SVIDKVMFQN DKLISCADET SYPFYNAPQP | 120 |
PTQAQLDAMC KSTACIDGVA DALKEEPVEC IMPLNKLLLR SEILDRIAVY CEDGEITTPA | 180 |
PTVAEPIPLP LFPIPGPAAT PAPGPVPSFP TPVCSVETLA PVQTVTDELI QCATDASFAF | 240 |
LPLSRPSEAT IAKMCASESC VKVITAALAA NPTECTAPVG NIQYRAEFLD LIGSACEISS | 300 |
TTPAPTTTTP ATTTPATTAP STPDQVCELA TLNKLLYEND EFVTCALDTE FPLLNFGAAP | 360 |
SKEQMDKFCT SETCSKAFAD ALEAGPTECR FPVTQLTLVG DFLDRVVSYC KTGVVPTTSP | 420 |
SLPPPAPQPT PAPTPVPAPG PVPSFPTPVC SVETLAPVQT VTDELIQCAT DASFAFLPLS | 480 |
RPSEATIAKM CASESCVKVI TAALAANPTE CTAPVGNIQY RAEFLDLIGS ACEISSTTPA | 540 |
PTTTTPATTT PATTAPSTPD QVCELATLNK LLYENDEFVT CALDTEFPLL NFGAAPSKEQ | 600 |
MDKFCTSETC SKAFADALEA GPTECRFPVT QLTLVGDFLD RVVSYCKTGV VPTTSPSLPP | 660 |
PAPQPTPAPT PVPAPGPVPS FPTPVCSVET LAPVQTVTDE LIQCATDASF AFLPLSRPSE | 720 |
ATIAKMCASE SCVKVITAAL AANPTECTAP VGNIQYRAEF LDLIGSACEI SSTTPAPTTT | 780 |
TPATTTPATT APSTPDQVCE LATLNKLLYE NDEFVTCALD TEFPLLNFGA APSKEQMDKF | 840 |
CTSETCSKAF ADALEAGPTE CRFPVTQLTL VGDFLDRVVS YCKTGVVPTT SPSLPPPAPQ | 900 |
PTPAPTPVPA PGPVPSFPTP VCSVETLAPV QTVTDELIQC ATDASFAFLP LSRPSEATIA | 960 |
KMCASESCVK VITAALAANP TECTAPVGNI QYRAEFLDLI GSACEISSTT PAPTTTTPAT | 1020 |
TTPATTAPST PDQVCELATL NKLLYENDEF VTCALDTEFP LLNFGAAPSK EQMDKFCTSE | 1080 |
TCSKAFADAL EAGPTECRFP VTQLTLVGDF LDRVVSYCKT GVVPTTSPSL PPPAPQPTPA | 1140 |
PTPVPAPGPV PSFPTPVCSV ETLAPVQTVT DELIQCATDA SFAFLPLSRP SEATIAKMCA | 1200 |
SESCVKVITA ALAANPTECT APVGNIQYRA EFLDLIGSAC EISSTTPAPT TTTPATTTPA | 1260 |
TTAPSTPDQV CELATLNKLL YENDEFVTCA LDTEFPLLNF GAAPSKEQMD KFCTSETCSK | 1320 |
AFADALEAGP TECRFPVTQL TLVGDFLDRV VSYCKTGVVP TTSPSLPPPA PQPTPAPTPV | 1380 |
PAPGPVPSFP TPVCSVETLA PVQTVTDELI QCATDASFAF LPLSRPSEAT IAKMCASESC | 1440 |
VKVITAALAA NPTECTAPVG NIQYRAEFLD LIGSACEISS TTPAPTTTTP ATTTPATTAP | 1500 |
STPDQVCELA TLNKLLYEND EFVTCALDTE FPLLNFGAAP SKEQMDKFCT SETCSKAFAD | 1560 |
ALEAGPTECR FPVTQLTLVG DFLDRVVSYC KTGVVPTTSP SLPPPAPQPT PAPTPVPAPG | 1620 |
PVPSFPTPVC SVETLAPVQT VTDELIQCAT DASFAFLPLS RPSEATIAKM CASESCVKVI | 1680 |
TAALAANPTE CTAPVGNIQY RAEFLDLIGS ACEISSTTPA PTTTTPATTT PATTAPSTPE | 1740 |
PTTPASTTPE PTTPAPITPT PTAPANGDCG NDKVGPSQCP QGQYCQPWNP SHYQCRSIDA | 1800 |
KCGKQEVGID YFGDDIASLS VLVPEQCCDK CRATTGCKAY TFVNFNADGR AMCYLKKGTG | 1860 |
EKRAAPRAVS AVIDSSAPTC AAAGAQCGSD REGAACCPSG HHCQPWNPFY YQCIPSPPKC | 1920 |
AAQEVGIDYF GEDLQTVYGL QPSGCCDRCA ETAGCKAYTF VNYNRDGRTA CYLKKGRGEK | 1980 |
RKMVGAVSST VITPKPPGCA TPQWGSCGNE LGATCCPSGF YCQPWNPHYY QCMATPAKCS | 2040 |
EQLTDVDFLG NDIATVFGIT PEQCCDRCAE TAGCKAYTFV NANPGRPACY LKSSAAGRKT | 2100 |
LSGAVSGIVN | 2110 |
Predicted 3D structure by AlphaFold2 with pLDDT = 55.84 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MKLSVVFVGA IHAAWMALAL AASDDAFPMA RVTSADLTET TTPLATETTT PLATETPSPT | 60 |
SPTQETATPT ETSSAPTTPA PVTPIEQCLA SVIDKVMFQN DKLISCADET SYPFYNAPQP | 120 |
PTQAQLDAMC KSTACIDGVA DALKEEPVEC IMPLNKLLLR SEILDRIAVY CEDGEITTPA | 180 |
PTVAEPIPLP LFPIPGPAAT PAPGPVPSFP TPVCSVETLA PVQTVTDELI QCATDASFAF | 240 |
LPLSRPSEAT IAKMCASESC VKVITAALAA NPTECTAPVG NIQYRAEFLD LIGSACEISS | 300 |
TTPAPTTTTP ATTTPATTAP STPDQVCELA TLNKLLYEND EFVTCALDTE FPLLNFGAAP | 360 |
SKEQMDKFCT SETCSKAFAD ALEAGPTECR FPVTQLTLVG DFLDRVVSYC KTGVVPTTSP | 420 |
SLPPPAPQPT PAPTPVPAPG PVPSFPTPVC SVETLAPVQT VTDELIQCAT DASFAFLPLS | 480 |
RPSEATIAKM CASESCVKVI TAALAANPTE CTAPVGNIQY RAEFLDLIGS ACEISSTTPA | 540 |
PTTTTPATTT PATTAPSTPD QVCELATLNK LLYENDEFVT CALDTEFPLL NFGAAPSKEQ | 600 |
MDKFCTSETC SKAFADALEA GPTECRFPVT QLTLVGDFLD RVVSYCKTGV VPTTSPSLPP | 660 |
PAPQPTPAPT PVPAPGPVPS FPTPVCSVET LAPVQTVTDE LIQCATDASF AFLPLSRPSE | 720 |
ATIAKMCASE SCVKVITAAL AANPTECTAP VGNIQYRAEF LDLIGSACEI SSTTPAPTTT | 780 |
TPATTTPATT APSTPDQVCE LATLNKLLYE NDEFVTCALD TEFPLLNFGA APSKEQMDKF | 840 |
CTSETCSKAF ADALEAGPTE CRFPVTQLTL VGDFLDRVVS YCKTGVVPTT SPSLPPPAPQ | 900 |
PTPAPTPVPA PGPVPSFPTP VCSVETLAPV QTVTDELIQC ATDASFAFLP LSRPSEATIA | 960 |
KMCASESCVK VITAALAANP TECTAPVGNI QYRAEFLDLI GSACEISSTT PAPTTTTPAT | 1020 |
TTPATTAPST PDQVCELATL NKLLYENDEF VTCALDTEFP LLNFGAAPSK EQMDKFCTSE | 1080 |
TCSKAFADAL EAGPTECRFP VTQLTLVGDF LDRVVSYCKT GVVPTTSPSL PPPAPQPTPA | 1140 |
PTPVPAPGPV PSFPTPVCSV ETLAPVQTVT DELIQCATDA SFAFLPLSRP SEATIAKMCA | 1200 |
SESCVKVITA ALAANPTECT APVGNIQYRA EFLDLIGSAC EISSTTPAPT TTTPATTTPA | 1260 |
TTAPSTPDQV CELATLNKLL YENDEFVTCA LDTEFPLLNF GAAPSKEQMD KFCTSETCSK | 1320 |
AFADALEAGP TECRFPVTQL TLVGDFLDRV VSYCKTGVVP TTSPSLPPPA PQPTPAPTPV | 1380 |
PAPGPVPSFP TPVCSVETLA PVQTVTDELI QCATDASFAF LPLSRPSEAT IAKMCASESC | 1440 |
VKVITAALAA NPTECTAPVG NIQYRAEFLD LIGSACEISS TTPAPTTTTP ATTTPATTAP | 1500 |
STPDQVCELA TLNKLLYEND EFVTCALDTE FPLLNFGAAP SKEQMDKFCT SETCSKAFAD | 1560 |
ALEAGPTECR FPVTQLTLVG DFLDRVVSYC KTGVVPTTSP SLPPPAPQPT PAPTPVPAPG | 1620 |
PVPSFPTPVC SVETLAPVQT VTDELIQCAT DASFAFLPLS RPSEATIAKM CASESCVKVI | 1680 |
TAALAANPTE CTAPVGNIQY RAEFLDLIGS ACEISSTTPA PTTTTPATTT PATTAPSTPE | 1740 |
PTTPASTTPE PTTPAPITPT PTAPANGDCG NDKVGPSQCP QGQYCQPWNP SHYQCRSIDA | 1800 |
KCGKQEVGID YFGDDIASLS VLVPEQCCDK CRATTGCKAY TFVNFNADGR AMCYLKKGTG | 1860 |
EKRAAPRAVS AVIDSSAPTC AAAGAQCGSD REGAACCPSG HHCQPWNPFY YQCIPSPPKC | 1920 |
AAQEVGIDYF GEDLQTVYGL QPSGCCDRCA ETAGCKAYTF VNYNRDGRTA CYLKKGRGEK | 1980 |
RKMVGAVSST VITPKPPGCA TPQWGSCGNE LGATCCPSGF YCQPWNPHYY QCMATPAKCS | 2040 |
EQLTDVDFLG NDIATVFGIT PEQCCDRCAE TAGCKAYTFV NANPGRPACY LKSSAAGRKT | 2100 |
LSGAVSGIVN | 2110 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.