Basic information |
Taxonomy |
Protein Sequence |
Structure visualization |
Binding Residues |
dbCAN domains |
Homology within Cluster
Information for CAZyme ID: QYE52146.1
Basic Information
| GenBank ID | QYE52146.1 |
| Family | CBM1 |
| Sequence Length | 2110 |
| UniProt ID | QYE52146.1(MOD) |
| Average pLDDT? | 55.84 |
| CAZy50 ID | 1251 |
| CAZy50 Rep | Yes, QYE52146.1 |
| Structure Cluster | SC_CBM1_clus109 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 88834 |
| Kingdom | Eukaryota |
| Phylum | Oomycota |
| Class | |
| Order | Pythiales |
| Family | Pythiaceae |
| Genus | Pythium |
| Species | Pythium porphyrae |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKLSVVFVGA IHAAWMALAL AASDDAFPMA RVTSADLTET TTPLATETTT PLATETPSPT | 60 |
| SPTQETATPT ETSSAPTTPA PVTPIEQCLA SVIDKVMFQN DKLISCADET SYPFYNAPQP | 120 |
| PTQAQLDAMC KSTACIDGVA DALKEEPVEC IMPLNKLLLR SEILDRIAVY CEDGEITTPA | 180 |
| PTVAEPIPLP LFPIPGPAAT PAPGPVPSFP TPVCSVETLA PVQTVTDELI QCATDASFAF | 240 |
| LPLSRPSEAT IAKMCASESC VKVITAALAA NPTECTAPVG NIQYRAEFLD LIGSACEISS | 300 |
| TTPAPTTTTP ATTTPATTAP STPDQVCELA TLNKLLYEND EFVTCALDTE FPLLNFGAAP | 360 |
| SKEQMDKFCT SETCSKAFAD ALEAGPTECR FPVTQLTLVG DFLDRVVSYC KTGVVPTTSP | 420 |
| SLPPPAPQPT PAPTPVPAPG PVPSFPTPVC SVETLAPVQT VTDELIQCAT DASFAFLPLS | 480 |
| RPSEATIAKM CASESCVKVI TAALAANPTE CTAPVGNIQY RAEFLDLIGS ACEISSTTPA | 540 |
| PTTTTPATTT PATTAPSTPD QVCELATLNK LLYENDEFVT CALDTEFPLL NFGAAPSKEQ | 600 |
| MDKFCTSETC SKAFADALEA GPTECRFPVT QLTLVGDFLD RVVSYCKTGV VPTTSPSLPP | 660 |
| PAPQPTPAPT PVPAPGPVPS FPTPVCSVET LAPVQTVTDE LIQCATDASF AFLPLSRPSE | 720 |
| ATIAKMCASE SCVKVITAAL AANPTECTAP VGNIQYRAEF LDLIGSACEI SSTTPAPTTT | 780 |
| TPATTTPATT APSTPDQVCE LATLNKLLYE NDEFVTCALD TEFPLLNFGA APSKEQMDKF | 840 |
| CTSETCSKAF ADALEAGPTE CRFPVTQLTL VGDFLDRVVS YCKTGVVPTT SPSLPPPAPQ | 900 |
| PTPAPTPVPA PGPVPSFPTP VCSVETLAPV QTVTDELIQC ATDASFAFLP LSRPSEATIA | 960 |
| KMCASESCVK VITAALAANP TECTAPVGNI QYRAEFLDLI GSACEISSTT PAPTTTTPAT | 1020 |
| TTPATTAPST PDQVCELATL NKLLYENDEF VTCALDTEFP LLNFGAAPSK EQMDKFCTSE | 1080 |
| TCSKAFADAL EAGPTECRFP VTQLTLVGDF LDRVVSYCKT GVVPTTSPSL PPPAPQPTPA | 1140 |
| PTPVPAPGPV PSFPTPVCSV ETLAPVQTVT DELIQCATDA SFAFLPLSRP SEATIAKMCA | 1200 |
| SESCVKVITA ALAANPTECT APVGNIQYRA EFLDLIGSAC EISSTTPAPT TTTPATTTPA | 1260 |
| TTAPSTPDQV CELATLNKLL YENDEFVTCA LDTEFPLLNF GAAPSKEQMD KFCTSETCSK | 1320 |
| AFADALEAGP TECRFPVTQL TLVGDFLDRV VSYCKTGVVP TTSPSLPPPA PQPTPAPTPV | 1380 |
| PAPGPVPSFP TPVCSVETLA PVQTVTDELI QCATDASFAF LPLSRPSEAT IAKMCASESC | 1440 |
| VKVITAALAA NPTECTAPVG NIQYRAEFLD LIGSACEISS TTPAPTTTTP ATTTPATTAP | 1500 |
| STPDQVCELA TLNKLLYEND EFVTCALDTE FPLLNFGAAP SKEQMDKFCT SETCSKAFAD | 1560 |
| ALEAGPTECR FPVTQLTLVG DFLDRVVSYC KTGVVPTTSP SLPPPAPQPT PAPTPVPAPG | 1620 |
| PVPSFPTPVC SVETLAPVQT VTDELIQCAT DASFAFLPLS RPSEATIAKM CASESCVKVI | 1680 |
| TAALAANPTE CTAPVGNIQY RAEFLDLIGS ACEISSTTPA PTTTTPATTT PATTAPSTPE | 1740 |
| PTTPASTTPE PTTPAPITPT PTAPANGDCG NDKVGPSQCP QGQYCQPWNP SHYQCRSIDA | 1800 |
| KCGKQEVGID YFGDDIASLS VLVPEQCCDK CRATTGCKAY TFVNFNADGR AMCYLKKGTG | 1860 |
| EKRAAPRAVS AVIDSSAPTC AAAGAQCGSD REGAACCPSG HHCQPWNPFY YQCIPSPPKC | 1920 |
| AAQEVGIDYF GEDLQTVYGL QPSGCCDRCA ETAGCKAYTF VNYNRDGRTA CYLKKGRGEK | 1980 |
| RKMVGAVSST VITPKPPGCA TPQWGSCGNE LGATCCPSGF YCQPWNPHYY QCMATPAKCS | 2040 |
| EQLTDVDFLG NDIATVFGIT PEQCCDRCAE TAGCKAYTFV NANPGRPACY LKSSAAGRKT | 2100 |
| LSGAVSGIVN | 2110 |
Predicted 3D structure by AlphaFold2 with pLDDT = 55.84 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MKLSVVFVGA IHAAWMALAL AASDDAFPMA RVTSADLTET TTPLATETTT PLATETPSPT | 60 |
| SPTQETATPT ETSSAPTTPA PVTPIEQCLA SVIDKVMFQN DKLISCADET SYPFYNAPQP | 120 |
| PTQAQLDAMC KSTACIDGVA DALKEEPVEC IMPLNKLLLR SEILDRIAVY CEDGEITTPA | 180 |
| PTVAEPIPLP LFPIPGPAAT PAPGPVPSFP TPVCSVETLA PVQTVTDELI QCATDASFAF | 240 |
| LPLSRPSEAT IAKMCASESC VKVITAALAA NPTECTAPVG NIQYRAEFLD LIGSACEISS | 300 |
| TTPAPTTTTP ATTTPATTAP STPDQVCELA TLNKLLYEND EFVTCALDTE FPLLNFGAAP | 360 |
| SKEQMDKFCT SETCSKAFAD ALEAGPTECR FPVTQLTLVG DFLDRVVSYC KTGVVPTTSP | 420 |
| SLPPPAPQPT PAPTPVPAPG PVPSFPTPVC SVETLAPVQT VTDELIQCAT DASFAFLPLS | 480 |
| RPSEATIAKM CASESCVKVI TAALAANPTE CTAPVGNIQY RAEFLDLIGS ACEISSTTPA | 540 |
| PTTTTPATTT PATTAPSTPD QVCELATLNK LLYENDEFVT CALDTEFPLL NFGAAPSKEQ | 600 |
| MDKFCTSETC SKAFADALEA GPTECRFPVT QLTLVGDFLD RVVSYCKTGV VPTTSPSLPP | 660 |
| PAPQPTPAPT PVPAPGPVPS FPTPVCSVET LAPVQTVTDE LIQCATDASF AFLPLSRPSE | 720 |
| ATIAKMCASE SCVKVITAAL AANPTECTAP VGNIQYRAEF LDLIGSACEI SSTTPAPTTT | 780 |
| TPATTTPATT APSTPDQVCE LATLNKLLYE NDEFVTCALD TEFPLLNFGA APSKEQMDKF | 840 |
| CTSETCSKAF ADALEAGPTE CRFPVTQLTL VGDFLDRVVS YCKTGVVPTT SPSLPPPAPQ | 900 |
| PTPAPTPVPA PGPVPSFPTP VCSVETLAPV QTVTDELIQC ATDASFAFLP LSRPSEATIA | 960 |
| KMCASESCVK VITAALAANP TECTAPVGNI QYRAEFLDLI GSACEISSTT PAPTTTTPAT | 1020 |
| TTPATTAPST PDQVCELATL NKLLYENDEF VTCALDTEFP LLNFGAAPSK EQMDKFCTSE | 1080 |
| TCSKAFADAL EAGPTECRFP VTQLTLVGDF LDRVVSYCKT GVVPTTSPSL PPPAPQPTPA | 1140 |
| PTPVPAPGPV PSFPTPVCSV ETLAPVQTVT DELIQCATDA SFAFLPLSRP SEATIAKMCA | 1200 |
| SESCVKVITA ALAANPTECT APVGNIQYRA EFLDLIGSAC EISSTTPAPT TTTPATTTPA | 1260 |
| TTAPSTPDQV CELATLNKLL YENDEFVTCA LDTEFPLLNF GAAPSKEQMD KFCTSETCSK | 1320 |
| AFADALEAGP TECRFPVTQL TLVGDFLDRV VSYCKTGVVP TTSPSLPPPA PQPTPAPTPV | 1380 |
| PAPGPVPSFP TPVCSVETLA PVQTVTDELI QCATDASFAF LPLSRPSEAT IAKMCASESC | 1440 |
| VKVITAALAA NPTECTAPVG NIQYRAEFLD LIGSACEISS TTPAPTTTTP ATTTPATTAP | 1500 |
| STPDQVCELA TLNKLLYEND EFVTCALDTE FPLLNFGAAP SKEQMDKFCT SETCSKAFAD | 1560 |
| ALEAGPTECR FPVTQLTLVG DFLDRVVSYC KTGVVPTTSP SLPPPAPQPT PAPTPVPAPG | 1620 |
| PVPSFPTPVC SVETLAPVQT VTDELIQCAT DASFAFLPLS RPSEATIAKM CASESCVKVI | 1680 |
| TAALAANPTE CTAPVGNIQY RAEFLDLIGS ACEISSTTPA PTTTTPATTT PATTAPSTPE | 1740 |
| PTTPASTTPE PTTPAPITPT PTAPANGDCG NDKVGPSQCP QGQYCQPWNP SHYQCRSIDA | 1800 |
| KCGKQEVGID YFGDDIASLS VLVPEQCCDK CRATTGCKAY TFVNFNADGR AMCYLKKGTG | 1860 |
| EKRAAPRAVS AVIDSSAPTC AAAGAQCGSD REGAACCPSG HHCQPWNPFY YQCIPSPPKC | 1920 |
| AAQEVGIDYF GEDLQTVYGL QPSGCCDRCA ETAGCKAYTF VNYNRDGRTA CYLKKGRGEK | 1980 |
| RKMVGAVSST VITPKPPGCA TPQWGSCGNE LGATCCPSGF YCQPWNPHYY QCMATPAKCS | 2040 |
| EQLTDVDFLG NDIATVFGIT PEQCCDRCAE TAGCKAYTFV NANPGRPACY LKSSAAGRKT | 2100 |
| LSGAVSGIVN | 2110 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.