Information for CAZyme ID: QXV65251.1
Basic Information
| GenBank ID | QXV65251.1 |
| Family | GH2 |
| Sequence Length | 713 |
| UniProt ID | A0A563U218(98.6,100) |
| Average pLDDT? | 91.82 |
| CAZy50 ID | 37082 |
| CAZy50 Rep | Yes, QXV65251.1 |
| Structure Cluster | SC_GH2_clus95 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2778902 |
| Kingdom | Bacteria |
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Mucilaginibacter |
| Species | Mucilaginibacter sp. 21P |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MTRFAKDVDT GSVLPEYPRP QLQRTDWMNL NGIWQYKPGT WQNEPYPKND LGKRILVPFP | 60 |
| VEAALSGVME HHDRLWYRRN FVIPAGWQGR RVILHFGAVD YDCEVFINDK SVGKHQGGYD | 120 |
| AFSFDVSDFL TKGNQTITVK VFDPTDGGGF PRGKQTLNPQ GIMYTSTTGI WQTVWLEPVQ | 180 |
| RTHIESVKMT PDIDHSVLNL SLQTAFGDQT QFTAEIKENG HTIQTYRGDA SAPAQIKLKN | 240 |
| PHLWSPDHPF LYDMDITLRD DAGKTVDVVK TYFGMRKSSI GYDGKFYRLY LNNKPLFQYG | 300 |
| PLDQGFWPDG IYTAPTDAAL RSDLEMIKKL GFNMVRKHIK VEPQRWYYWA DKLGLLVWQD | 360 |
| MPSPNSYTFG TPPPEKEAFA NELTRLVENH YNSPSIVTWV IFNENQGQHD TKKYVALVRG | 420 |
| LDQSRIVNEG SGSNNVGVGD LYDIHPYPAP MYPRSKSQAN VCGEFGGIGF QPFEKVWNSK | 480 |
| DLTQYVTMKN TTDYLALYDK FAGMLAKFRT YNGLSAAVYT EITDVEIELN GLMTYDRVLK | 540 |
| ADADKIRRSN EKAMYQKVIN KDVIILSTAE TEPAKWSYTF KMPKADWTTA STDTSVWSQG | 600 |
| EGGFGTFFTP GAHIGTEWNT SDIWLRRNFS LRNVSHGNLK NFKLRVHHDE DCEIYINGKL | 660 |
| VAKLNGWTSD YEDVDMMPSF QSALNKKGNN IMAVHCKNTN SGQYIDVGLV LNR | 713 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.82 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MTRFAKDVDT GSVLPEYPRP QLQRTDWMNL NGIWQYKPGT WQNEPYPKND LGKRILVPFP | 60 |
| VEAALSGVME HHDRLWYRRN FVIPAGWQGR RVILHFGAVD YDCEVFINDK SVGKHQGGYD | 120 |
| AFSFDVSDFL TKGNQTITVK VFDPTDGGGF PRGKQTLNPQ GIMYTSTTGI WQTVWLEPVQ | 180 |
| RTHIESVKMT PDIDHSVLNL SLQTAFGDQT QFTAEIKENG HTIQTYRGDA SAPAQIKLKN | 240 |
| PHLWSPDHPF LYDMDITLRD DAGKTVDVVK TYFGMRKSSI GYDGKFYRLY LNNKPLFQYG | 300 |
| PLDQGFWPDG IYTAPTDAAL RSDLEMIKKL GFNMVRKHIK VEPQRWYYWA DKLGLLVWQD | 360 |
| MPSPNSYTFG TPPPEKEAFA NELTRLVENH YNSPSIVTWV IFNENQGQHD TKKYVALVRG | 420 |
| LDQSRIVNEG SGSNNVGVGD LYDIHPYPAP MYPRSKSQAN VCGEFGGIGF QPFEKVWNSK | 480 |
| DLTQYVTMKN TTDYLALYDK FAGMLAKFRT YNGLSAAVYT EITDVEIELN GLMTYDRVLK | 540 |
| ADADKIRRSN EKAMYQKVIN KDVIILSTAE TEPAKWSYTF KMPKADWTTA STDTSVWSQG | 600 |
| EGGFGTFFTP GAHIGTEWNT SDIWLRRNFS LRNVSHGNLK NFKLRVHHDE DCEIYINGKL | 660 |
| VAKLNGWTSD YEDVDMMPSF QSALNKKGNN IMAVHCKNTN SGQYIDVGLV LNR | 713 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.