Information for CAZyme ID: QWG04463.1
Basic Information
GenBank ID | QWG04463.1 |
Family | CBM36, CBM6, GH8 |
Sequence Length | 1054 |
UniProt ID | A0A7X9TNH5(100,100)![]() |
Average pLDDT? | 84.04 |
CAZy50 ID | 12044 |
CAZy50 Rep | Yes, QWG04463.1 |
Structure Cluster | SC_CBM36_clus1, SC_CBM36_clus2, SC_CBM6_clus32, SC_CBM6_clus39, SC_GH8_clus12 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 367791 |
Kingdom | Bacteria |
Phylum | Bacteroidota |
Class | Cytophagia |
Order | Cytophagales |
Family | Flammeovirgaceae |
Genus | Flammeovirga |
Species | Flammeovirga yaeyamensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKNYLNEKVN FRNNHVKPPS FVKTIALLFI SLLFFRVDCN AVISNSGITI QTETMTLGGA | 60 |
YAGTTTTPFD GIILYANDDN GSTTIQLSNA PGVFDISLRG ASTNASAAGV SLEIDGTEIT | 120 |
TFSFSGTVPS IDTKSIKIEG NAGSKVIRLV LKTDNGSNDT LLDWISFTRT GDIPPPPAPP | 180 |
TLPSEGAFYT GNYRNMFKEA GYTQQQIDDK INSVYQQLFY GDNDTERVYY PKGTDEGYIL | 240 |
DIDNNDVRSE GMSYGMMIAV QMNKQEEFDR IWKFAKTHMQ HGPGNREGYF RWIVDANGAE | 300 |
LDPNTASDGE IYFITALYFA SVRFGDRGGI YNYRAEADYI LEQIMNKGWP HNQIIGSVPN | 360 |
MFNEEKKVCF VPYAQASTYT DPSYFLPSFY EVWGMMAKTN RQYWKDAAVV ARDFFQAAAH | 420 |
PTTGLMPDYS NYDGSPTGGH KEDFVVDAWR CAMNVAMDYA WFKKDEREKT ITDNIQDFFY | 480 |
NEGIYSYSSG YTLDGNPLPG TDYQAVGLVA CNAMTSLAST DAKSWEFINA LWDRAPTTGR | 540 |
YRYYDGLLQM MCLLHLSGNF KAYVDGSTPP VDPNPIPVTG ITLTPSSLSL VVGQTSNLSV | 600 |
SISPSNADDK RVNYTSSNTN IATVSTLGVV QAIQEGSTTI TATTVDGGFT DETIITVSSP | 660 |
PTSGQTPYLG SPQIIPGTIN PVTFDNGGQD VAYNDSDVDN NGNGDRQDTD VDTENRTNGG | 720 |
NIGWIAAGEW LEYTVDINTT ANYTLSAEVA SPSSDGKFHI EFNGVDKTGI INVSSTGGWG | 780 |
TFTNVTASNV SLTAGEQVMR IVFDEGGFNL GNLSFTEDNS NGGGDNGGDN GGNTGTCSFG | 840 |
LPSSEAFPTT NTSFTHAHVL GNGPDLSHVN NISVNWSKEG GQIWDFSMRT NNGVPNWYVD | 900 |
LKTAITHTLG SASPSITFSN SGFSGLDGAY WIGKEGSDVV LVSKTSDFTI YLSNSSSAPS | 960 |
CSNARLMTVN STSNSDLENE IQLYPNPATD QVSIKGLKST TTKIKIYTIS GVLVSTSILN | 1020 |
EDERKLNVSA LKKGTYVLQL LSDDDYQIKK LMIQ | 1054 |
Predicted 3D structure by AlphaFold2 with pLDDT = 84.04 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MKNYLNEKVN FRNNHVKPPS FVKTIALLFI SLLFFRVDCN AVISNSGITI QTETMTLGGA | 60 |
YAGTTTTPFD GIILYANDDN GSTTIQLSNA PGVFDISLRG ASTNASAAGV SLEIDGTEIT | 120 |
TFSFSGTVPS IDTKSIKIEG NAGSKVIRLV LKTDNGSNDT LLDWISFTRT GDIPPPPAPP | 180 |
TLPSEGAFYT GNYRNMFKEA GYTQQQIDDK INSVYQQLFY GDNDTERVYY PKGTDEGYIL | 240 |
DIDNNDVRSE GMSYGMMIAV QMNKQEEFDR IWKFAKTHMQ HGPGNREGYF RWIVDANGAE | 300 |
LDPNTASDGE IYFITALYFA SVRFGDRGGI YNYRAEADYI LEQIMNKGWP HNQIIGSVPN | 360 |
MFNEEKKVCF VPYAQASTYT DPSYFLPSFY EVWGMMAKTN RQYWKDAAVV ARDFFQAAAH | 420 |
PTTGLMPDYS NYDGSPTGGH KEDFVVDAWR CAMNVAMDYA WFKKDEREKT ITDNIQDFFY | 480 |
NEGIYSYSSG YTLDGNPLPG TDYQAVGLVA CNAMTSLAST DAKSWEFINA LWDRAPTTGR | 540 |
YRYYDGLLQM MCLLHLSGNF KAYVDGSTPP VDPNPIPVTG ITLTPSSLSL VVGQTSNLSV | 600 |
SISPSNADDK RVNYTSSNTN IATVSTLGVV QAIQEGSTTI TATTVDGGFT DETIITVSSP | 660 |
PTSGQTPYLG SPQIIPGTIN PVTFDNGGQD VAYNDSDVDN NGNGDRQDTD VDTENRTNGG | 720 |
NIGWIAAGEW LEYTVDINTT ANYTLSAEVA SPSSDGKFHI EFNGVDKTGI INVSSTGGWG | 780 |
TFTNVTASNV SLTAGEQVMR IVFDEGGFNL GNLSFTEDNS NGGGDNGGDN GGNTGTCSFG | 840 |
LPSSEAFPTT NTSFTHAHVL GNGPDLSHVN NISVNWSKEG GQIWDFSMRT NNGVPNWYVD | 900 |
LKTAITHTLG SASPSITFSN SGFSGLDGAY WIGKEGSDVV LVSKTSDFTI YLSNSSSAPS | 960 |
CSNARLMTVN STSNSDLENE IQLYPNPATD QVSIKGLKST TTKIKIYTIS GVLVSTSILN | 1020 |
EDERKLNVSA LKKGTYVLQL LSDDDYQIKK LMIQ | 1054 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.