Information for CAZyme ID: QUI22752.1
Basic Information
GenBank ID | QUI22752.1 |
Family | GH52 |
Sequence Length | 709 |
UniProt ID | A0A8J8SGV1(100,100)![]() |
Average pLDDT? | 94.31 |
CAZy50 ID | 37563 |
CAZy50 Rep | Yes, QUI22752.1 |
Structure Cluster | SC_GH52_clus2 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1348613 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Clostridia |
Order | Lachnospirales |
Family | Vallitaleaceae |
Genus | Vallitalea |
Species | Vallitalea pronyensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MHNNLFQSLH SPIGAGAAFA IGLEGTGGGF MLENDYVPEQ DIFIGYREEQ CVSLLPFYKK | 60 |
GQKTGKESYT QEEDSGEIKV ESIAPDKISR TFGYGTDTFR TEDIEFSITS RFNQLPDIEK | 120 |
HNPVAQGILS GEYYEDIKRK VLPVVVGKLV IDNRLGDNDK EGIFAISGNT RKIFLQQETK | 180 |
GRYAGYRSAD GYGFAVDNRG GTITEISDFD FPSLYRKTLP ACLVLGPMSG ILFQVPKGEK | 240 |
VEVDMVFGWF KEHETTEGLH RYKYLYTDYF NSLLEVFDYG FSQKDYLWVE ALEADKKVLE | 300 |
SELTEDQKIL VNQAAKSYYV SSMLFSEGNQ VRWVMNEGSF LMMNTFDLII DHMFFDLRYH | 360 |
GWVLRNQLAY YVKEYSYYDQ CGISFSHDQG VRNLFAPQGH SSYEIPNTKD CFSYMTQEEL | 420 |
CNWIITASIY VHQQQDIAFA MDMKDVIKDS LASMMKRDGD EALLDGIMDV DSSRCGTGAE | 480 |
ITTYDSLDES LGQARRNIYM AVKCFASYLG LVSLIEAVLE GIGEIDDQEA GKREMFVEAF | 540 |
NQLRKQAEAQ ALLGARTING FVGEDGTFPA IVKEGNETMI IPIVEGVIYP FYAGMDDWLL | 600 |
KQPETVALLN HLRGHIDVIL TKGKCLFDDG GWKLSATSVN SWMSKIFLCQ HIVEKILDMD | 660 |
MDMREANKAH VKWWIVNCPT NPGIDQVFDG HQEERGFHYP RAVTNTLWW | 709 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.31 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MHNNLFQSLH SPIGAGAAFA IGLEGTGGGF MLENDYVPEQ DIFIGYREEQ CVSLLPFYKK | 60 |
GQKTGKESYT QEEDSGEIKV ESIAPDKISR TFGYGTDTFR TEDIEFSITS RFNQLPDIEK | 120 |
HNPVAQGILS GEYYEDIKRK VLPVVVGKLV IDNRLGDNDK EGIFAISGNT RKIFLQQETK | 180 |
GRYAGYRSAD GYGFAVDNRG GTITEISDFD FPSLYRKTLP ACLVLGPMSG ILFQVPKGEK | 240 |
VEVDMVFGWF KEHETTEGLH RYKYLYTDYF NSLLEVFDYG FSQKDYLWVE ALEADKKVLE | 300 |
SELTEDQKIL VNQAAKSYYV SSMLFSEGNQ VRWVMNEGSF LMMNTFDLII DHMFFDLRYH | 360 |
GWVLRNQLAY YVKEYSYYDQ CGISFSHDQG VRNLFAPQGH SSYEIPNTKD CFSYMTQEEL | 420 |
CNWIITASIY VHQQQDIAFA MDMKDVIKDS LASMMKRDGD EALLDGIMDV DSSRCGTGAE | 480 |
ITTYDSLDES LGQARRNIYM AVKCFASYLG LVSLIEAVLE GIGEIDDQEA GKREMFVEAF | 540 |
NQLRKQAEAQ ALLGARTING FVGEDGTFPA IVKEGNETMI IPIVEGVIYP FYAGMDDWLL | 600 |
KQPETVALLN HLRGHIDVIL TKGKCLFDDG GWKLSATSVN SWMSKIFLCQ HIVEKILDMD | 660 |
MDMREANKAH VKWWIVNCPT NPGIDQVFDG HQEERGFHYP RAVTNTLWW | 709 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.