Information for CAZyme ID: QSY95793.1
Basic Information
| GenBank ID | QSY95793.1 |
| Family | GT102 |
| Sequence Length | 664 |
| UniProt ID | A0A5R9NF55(96.5,100) |
| Average pLDDT? | 83.76 |
| CAZy50 ID | 43167 |
| CAZy50 Rep | Yes, QSY95793.1 |
| Structure Cluster | SC_GT102_clus7 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1138189 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium bangladeshense |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MTINQPISSL PAGLPDLALL TEKAAGTGSV IVYQPYLDPS QRSQIDAAAM PLDISFNTQA | 60 |
| TTREYELFRT LHQHHQAIGL GNDVFWGLLS SKFEMKSVTS FASFVTEAEK ARAEGADAYL | 120 |
| YNPLIGHAAI YSNVWEHSLL GGHPGMDPIF LHIQELGYPI APPQDKTAFA FCNYFCGNRK | 180 |
| FWSGYFAFCE RILESLEAQA RAGTAAGIAY AGTAHYSRDA NATMRPFVIE RLLGLYVQQA | 240 |
| IASGLKIAAF VPTVADFEWK FGVRLGRMLH GLFAAKEAFL RSRDEALLTS WQQGRQPLIK | 300 |
| QPHLIWMADD PPAWMPRGEF IGGRELMRAT AQQPSVALPV PQQPTATERP AIPAAPKIEQ | 360 |
| PLGNQLQPFA GGWQAHKDRH CIWIVTPENY NHSHAFDEVA LGLQGAFEEL GGSAPIVRDM | 420 |
| NAFAGRAPII YGGNLLPAEI VGHLPKDSVV INLEQVSEES SWINSRYTSI LRAMPVLDYS | 480 |
| PRNRENLAAK GIDHAGVLEI GYSRCLSQIQ HAPVRDIDVL FYGSMNERRH HILKTLNDSG | 540 |
| LKVAHLFNIY GAERDAAIAR AKIVINIHHY ASGVFEIVRI SYLLANRVCV LTEGDIRDPD | 600 |
| LQPFVGGLAI ERYDDMIERC YKLIADADER DAIAATGLAA IRSRSQADML MSVMKASEKV | 660 |
| RHAH | 664 |
Predicted 3D structure by AlphaFold2 with pLDDT = 83.76 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MTINQPISSL PAGLPDLALL TEKAAGTGSV IVYQPYLDPS QRSQIDAAAM PLDISFNTQA | 60 |
| TTREYELFRT LHQHHQAIGL GNDVFWGLLS SKFEMKSVTS FASFVTEAEK ARAEGADAYL | 120 |
| YNPLIGHAAI YSNVWEHSLL GGHPGMDPIF LHIQELGYPI APPQDKTAFA FCNYFCGNRK | 180 |
| FWSGYFAFCE RILESLEAQA RAGTAAGIAY AGTAHYSRDA NATMRPFVIE RLLGLYVQQA | 240 |
| IASGLKIAAF VPTVADFEWK FGVRLGRMLH GLFAAKEAFL RSRDEALLTS WQQGRQPLIK | 300 |
| QPHLIWMADD PPAWMPRGEF IGGRELMRAT AQQPSVALPV PQQPTATERP AIPAAPKIEQ | 360 |
| PLGNQLQPFA GGWQAHKDRH CIWIVTPENY NHSHAFDEVA LGLQGAFEEL GGSAPIVRDM | 420 |
| NAFAGRAPII YGGNLLPAEI VGHLPKDSVV INLEQVSEES SWINSRYTSI LRAMPVLDYS | 480 |
| PRNRENLAAK GIDHAGVLEI GYSRCLSQIQ HAPVRDIDVL FYGSMNERRH HILKTLNDSG | 540 |
| LKVAHLFNIY GAERDAAIAR AKIVINIHHY ASGVFEIVRI SYLLANRVCV LTEGDIRDPD | 600 |
| LQPFVGGLAI ERYDDMIERC YKLIADADER DAIAATGLAA IRSRSQADML MSVMKASEKV | 660 |
| RHAH | 664 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.