Information for CAZyme ID: QSF46216.1
Basic Information
GenBank ID | QSF46216.1 |
Family | CBM6, GH43_16 |
Sequence Length | 1258 |
UniProt ID | QSF46216.1(MOD)![]() |
Average pLDDT? | 89.85 |
CAZy50 ID | 6804 |
CAZy50 Rep | Yes, QSF46216.1 |
Structure Cluster | SC_CBM6_clus10, SC_GH43_clus69 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2810347 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Bacilli |
Order | Bacillales |
Family | Paenibacillaceae |
Genus | Paenibacillus |
Species | Paenibacillus tianjinensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKIWNKLLAM MMVVTLTFVS NPATVRVQAA ASPLTPALAK TPGNGNPLFT QKFGADPFAM | 60 |
VYNGRVYVYM TNDVLEYNAD GTVKDNGYSK INKITVVSSD DMVNWTDHGE ILAAGPQGAA | 120 |
KWANNSWAPS AAHKTIDGKE KFFLYFADNG SGIGVLTADS PIGPFTDPIG KQLVSRSTPG | 180 |
ASDVTWLFDP AVLVDDDGSG YLYFGGGIPA GKDADPGTAR VAKLGADMIS LDLDASGGTL | 240 |
GRINPPWLFE DSGIHKYNGK YYYSYCTNFS SGHPSDIPTG TIAYMVSDNP MGPFTFVKTI | 300 |
LPNPATFFGA GGNNHHAIFE FNNQWYVTYH AQTLAKAMAE SGSYPQMGGQ PHGYRNAHIN | 360 |
KVSFDANGVI QNITGDYTGV PQLKNLDPYT RVEAETIGWN GGISTESSTE PGGMVSSINL | 420 |
AVSNINDGDW TAVSKVDFGA TGAGTFKANV ASGSGGGNIE LYLDSADGTL IGTLPVSNTG | 480 |
GESSWKTKTT SISGATGVHD LYMVYKGSST GNLFKVDSWQ FEQKSAAHDL VAINASIDKQ | 540 |
KIDIVTGTNQ ANMKVSAIYA DGTSTDVTAE AVATPAQSGI VSVNNGVVTG VGYGSTSIDV | 600 |
TYGGKTDTLN MLVKDLNSEL TVKKITVDNA SVVLDSGKTA TFKVIAEYVD GQTEDVTKTA | 660 |
IYSNSSPAIA DVAGGTITAK ASGTTNVTVS FKGAVGAAVT AQITVVVNTP AVVAIEAETA | 720 |
AENTATAYVY GTINGHTWSL VDGQSTKAMF FGPNNGFAAS ATDAASLAAN SRLGYKINFT | 780 |
TAGTYNVWIL VKTLGFDSDS IHVGLDNQYK FTSNGIEGVS GGQFKWANIS GNSGGIFGGA | 840 |
TLNVTAGEHE LNFWGREDGL AIDRIYLTTS SSTADPVWPS SSVAVTGVTL DKSSLSLATG | 900 |
STETLTATIT PADATNKTVT FSSNDTGVAT VTGAVYDSST GTTSVTVHAI AAGNAVITVT | 960 |
TADGNQTAVS NVTVTPSVEP QVPTAALSAD SSVNPGSSFI VAVSLNNAEQ RVFAEDITLT | 1020 |
YDSNLFEYVS AAGADNNIQI VTEDKANAGK VRLIAANIGG ISGASTPVLN LTFKVKAGVQ | 1080 |
NTTGTIAATE AKLGIAPEGT VIEAALSSKS ISIGRIEVVV DKTALTTTIT KAQSLYDASV | 1140 |
VGTQPGQYPQ AAKDALGAAI NAAKAVKDNQ SATQYQVDSA VTALVSAEET FEAAVIKAAS | 1200 |
ADLNNDKIIN VGDLAIVAYY YGKDSTSPDW AKAKIADLNG DNKVDIIDLA YVATKILE | 1258 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.85 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MKIWNKLLAM MMVVTLTFVS NPATVRVQAA ASPLTPALAK TPGNGNPLFT QKFGADPFAM | 60 |
VYNGRVYVYM TNDVLEYNAD GTVKDNGYSK INKITVVSSD DMVNWTDHGE ILAAGPQGAA | 120 |
KWANNSWAPS AAHKTIDGKE KFFLYFADNG SGIGVLTADS PIGPFTDPIG KQLVSRSTPG | 180 |
ASDVTWLFDP AVLVDDDGSG YLYFGGGIPA GKDADPGTAR VAKLGADMIS LDLDASGGTL | 240 |
GRINPPWLFE DSGIHKYNGK YYYSYCTNFS SGHPSDIPTG TIAYMVSDNP MGPFTFVKTI | 300 |
LPNPATFFGA GGNNHHAIFE FNNQWYVTYH AQTLAKAMAE SGSYPQMGGQ PHGYRNAHIN | 360 |
KVSFDANGVI QNITGDYTGV PQLKNLDPYT RVEAETIGWN GGISTESSTE PGGMVSSINL | 420 |
AVSNINDGDW TAVSKVDFGA TGAGTFKANV ASGSGGGNIE LYLDSADGTL IGTLPVSNTG | 480 |
GESSWKTKTT SISGATGVHD LYMVYKGSST GNLFKVDSWQ FEQKSAAHDL VAINASIDKQ | 540 |
KIDIVTGTNQ ANMKVSAIYA DGTSTDVTAE AVATPAQSGI VSVNNGVVTG VGYGSTSIDV | 600 |
TYGGKTDTLN MLVKDLNSEL TVKKITVDNA SVVLDSGKTA TFKVIAEYVD GQTEDVTKTA | 660 |
IYSNSSPAIA DVAGGTITAK ASGTTNVTVS FKGAVGAAVT AQITVVVNTP AVVAIEAETA | 720 |
AENTATAYVY GTINGHTWSL VDGQSTKAMF FGPNNGFAAS ATDAASLAAN SRLGYKINFT | 780 |
TAGTYNVWIL VKTLGFDSDS IHVGLDNQYK FTSNGIEGVS GGQFKWANIS GNSGGIFGGA | 840 |
TLNVTAGEHE LNFWGREDGL AIDRIYLTTS SSTADPVWPS SSVAVTGVTL DKSSLSLATG | 900 |
STETLTATIT PADATNKTVT FSSNDTGVAT VTGAVYDSST GTTSVTVHAI AAGNAVITVT | 960 |
TADGNQTAVS NVTVTPSVEP QVPTAALSAD SSVNPGSSFI VAVSLNNAEQ RVFAEDITLT | 1020 |
YDSNLFEYVS AAGADNNIQI VTEDKANAGK VRLIAANIGG ISGASTPVLN LTFKVKAGVQ | 1080 |
NTTGTIAATE AKLGIAPEGT VIEAALSSKS ISIGRIEVVV DKTALTTTIT KAQSLYDASV | 1140 |
VGTQPGQYPQ AAKDALGAAI NAAKAVKDNQ SATQYQVDSA VTALVSAEET FEAAVIKAAS | 1200 |
ADLNNDKIIN VGDLAIVAYY YGKDSTSPDW AKAKIADLNG DNKVDIIDLA YVATKILE | 1258 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.