Information for CAZyme ID: QRV79035.1
Basic Information
GenBank ID | QRV79035.1 |
Family | AA3_1 |
Sequence Length | 586 |
UniProt ID | A0A8H8IZM4(100,100)![]() |
Average pLDDT? | 84.68 |
CAZy50 ID | 54250 |
CAZy50 Rep | Yes, QRV79035.1 |
Structure Cluster | SC_AA3_clus94 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 170446 |
Kingdom | Eukaryota |
Phylum | Basidiomycota |
Class | Agaricomycetes |
Order | Cantharellales |
Family | Ceratobasidiaceae |
Genus | Ceratobasidium |
Species | Ceratobasidium sp. AG-Ba |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MLEHIIFVSL LASSALCFSR GPRPDFFNTA AQNNTLYDYI VVGAGPTGIV VADRLSESGK | 60 |
QVLLIERGGP STAQTGGTDV PPWANGTQLT RFDIPALYEG MYQGNDRYWW CDDMDPLAGC | 120 |
LVGGCSAING MLYWYPTDFE YSTSNGWPSG WQSVSAYMDK LKARLPSTNN PSKDGNFYLN | 180 |
QVYEVLGSML DKQGYTGIVA NDQRNNKDRV YSHTNYYIQN ATRTGPMDTY LKTAKARPNF | 240 |
TLLMNTKVIS VLRDGSHITG VQTNDSTVGN NGAIGVNPDG RVILAAGVFG TAKILFQSGI | 300 |
GPSDMLSLTA SNSSVSSYMP PASQYINLPV GQNMTDNPAV RAVFVHPSID NYNGYASIYT | 360 |
SPRPADVALY LPSGSGPLAS PSAHANFWRA YHGSDGRTRY GVDSDLRGVV LKDPWLTDPE | 420 |
DKTTLTNGFT DFLSTYQQVP GLQLVTPDSS VSLSSYVGET ASGSSHWVGS TKIGTSPSNS | 480 |
VVDQNTKVWN TGQSILAYEE SLDPQYCQSD NLHIVDAGIY PGVATGNPMG SFMVMAEMAA | 540 |
DKILAQTGTG SPQQTPNPGN SNSAVRNRIY GLSVHIFWAI IIVSAF | 586 |
Predicted 3D structure by AlphaFold2 with pLDDT = 84.68 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MLEHIIFVSL LASSALCFSR GPRPDFFNTA AQNNTLYDYI VVGAGPTGIV VADRLSESGK | 60 |
QVLLIERGGP STAQTGGTDV PPWANGTQLT RFDIPALYEG MYQGNDRYWW CDDMDPLAGC | 120 |
LVGGCSAING MLYWYPTDFE YSTSNGWPSG WQSVSAYMDK LKARLPSTNN PSKDGNFYLN | 180 |
QVYEVLGSML DKQGYTGIVA NDQRNNKDRV YSHTNYYIQN ATRTGPMDTY LKTAKARPNF | 240 |
TLLMNTKVIS VLRDGSHITG VQTNDSTVGN NGAIGVNPDG RVILAAGVFG TAKILFQSGI | 300 |
GPSDMLSLTA SNSSVSSYMP PASQYINLPV GQNMTDNPAV RAVFVHPSID NYNGYASIYT | 360 |
SPRPADVALY LPSGSGPLAS PSAHANFWRA YHGSDGRTRY GVDSDLRGVV LKDPWLTDPE | 420 |
DKTTLTNGFT DFLSTYQQVP GLQLVTPDSS VSLSSYVGET ASGSSHWVGS TKIGTSPSNS | 480 |
VVDQNTKVWN TGQSILAYEE SLDPQYCQSD NLHIVDAGIY PGVATGNPMG SFMVMAEMAA | 540 |
DKILAQTGTG SPQQTPNPGN SNSAVRNRIY GLSVHIFWAI IIVSAF | 586 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.