Information for CAZyme ID: QQZ61197.1
Basic Information
| GenBank ID | QQZ61197.1 |
| Family | GH78 |
| Sequence Length | 875 |
| UniProt ID | A0A974SCT5(100,100) |
| Average pLDDT? | 94.11 |
| CAZy50 ID | 21034 |
| CAZy50 Rep | Yes, QQZ61197.1 |
| Structure Cluster | SC_GH78_clus25 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 373687 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Bacillales |
| Family | Paenibacillaceae |
| Genus | Paenibacillus |
| Species | Paenibacillus sonchi |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MIQSNYQLIA YSNGEVIWNS GIVTGSESQF IRYDGAELVS RQQVNWNLSV TTVDETGIQE | 60 |
| TAHSEFARFE MGLLHPADWQ AKWIEPESEI DIEDRKPAPY LRRTLEVKPG LKQARIYQTA | 120 |
| HGLYEFWING HTGTEDKFKP GLTSYYARIQ IQAYDITKLL KEGSNAWAVM LGDGWWRGMT | 180 |
| GGTVKNNFGY KLHYFGQIEL TYENGEREVI GTDERFKYAT GGMLASDMLM GDIFDARKEF | 240 |
| VDWKLAVFDD NSWMNVHCTT EHADVRLIAS SSVPVREKEQ FTAQPFRDAA GQLVLDFGQN | 300 |
| IAGYVKMKLK NCKAGQKIRL VHGEDLKDGC FSLDNIKHGV LQSSEFQEVI YYCSGNAEEE | 360 |
| YCPLFSIFGF RYVLVEGYNE DINEGDFTAI AVYSDMEETG SFICSNLLIN KLVLNSFWSQ | 420 |
| KGNFMDVPVD CPTRERNAWT GDAQIYVRTA ADFMNVYSFF EKWLKDLSLE QYASGKVGIT | 480 |
| FPSTSSVHNP VELERNIKDN PLWALAGPSG NGSIGEDSAG WGDAAVWIPY MIYLCYGDKQ | 540 |
| ILVNQYETAR KWVDYMLACA KEHNPLYEQE SQYLNYEEGE LDADYIFDTK MHFGEWLEPI | 600 |
| TKEDTGESVA EAIIRMRTHG NPRVATAYMC RSAENVAHMA QILGNQEDCT KYKKIADKIR | 660 |
| KVYDRYLIGD DGVIEPGHQA AYVRVLAMDL CSEEKRESVV KQLLKEIENN NYRLNTGFLS | 720 |
| TPFLLHVLVD YGYSEIAFRI LEQTENPSWL HAVLLGSTTI LENWDGMDRH HGSYNHYSYG | 780 |
| AVCDFLFSRV AGITPLFEAP GYREFELRPI IGGTLTHAEA SYECPYGTIR SRWKKTKNGL | 840 |
| IYECSVPVNT RARVYLPDGQ CISVGSGDYR FSVGA | 875 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.11 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MIQSNYQLIA YSNGEVIWNS GIVTGSESQF IRYDGAELVS RQQVNWNLSV TTVDETGIQE | 60 |
| TAHSEFARFE MGLLHPADWQ AKWIEPESEI DIEDRKPAPY LRRTLEVKPG LKQARIYQTA | 120 |
| HGLYEFWING HTGTEDKFKP GLTSYYARIQ IQAYDITKLL KEGSNAWAVM LGDGWWRGMT | 180 |
| GGTVKNNFGY KLHYFGQIEL TYENGEREVI GTDERFKYAT GGMLASDMLM GDIFDARKEF | 240 |
| VDWKLAVFDD NSWMNVHCTT EHADVRLIAS SSVPVREKEQ FTAQPFRDAA GQLVLDFGQN | 300 |
| IAGYVKMKLK NCKAGQKIRL VHGEDLKDGC FSLDNIKHGV LQSSEFQEVI YYCSGNAEEE | 360 |
| YCPLFSIFGF RYVLVEGYNE DINEGDFTAI AVYSDMEETG SFICSNLLIN KLVLNSFWSQ | 420 |
| KGNFMDVPVD CPTRERNAWT GDAQIYVRTA ADFMNVYSFF EKWLKDLSLE QYASGKVGIT | 480 |
| FPSTSSVHNP VELERNIKDN PLWALAGPSG NGSIGEDSAG WGDAAVWIPY MIYLCYGDKQ | 540 |
| ILVNQYETAR KWVDYMLACA KEHNPLYEQE SQYLNYEEGE LDADYIFDTK MHFGEWLEPI | 600 |
| TKEDTGESVA EAIIRMRTHG NPRVATAYMC RSAENVAHMA QILGNQEDCT KYKKIADKIR | 660 |
| KVYDRYLIGD DGVIEPGHQA AYVRVLAMDL CSEEKRESVV KQLLKEIENN NYRLNTGFLS | 720 |
| TPFLLHVLVD YGYSEIAFRI LEQTENPSWL HAVLLGSTTI LENWDGMDRH HGSYNHYSYG | 780 |
| AVCDFLFSRV AGITPLFEAP GYREFELRPI IGGTLTHAEA SYECPYGTIR SRWKKTKNGL | 840 |
| IYECSVPVNT RARVYLPDGQ CISVGSGDYR FSVGA | 875 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.