Information for CAZyme ID: QOY89494.1
Basic Information
| GenBank ID | QOY89494.1 |
| Family | GH151 |
| Sequence Length | 681 |
| UniProt ID | A0A7S7NTL6(100,100) |
| Average pLDDT? | 93.12 |
| CAZy50 ID | 40986 |
| CAZy50 Rep | Yes, QOY89494.1 |
| Structure Cluster | SC_GH151_clus1 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1473598 |
| Kingdom | Bacteria |
| Phylum | Acidobacteriota |
| Class | Terriglobia |
| Order | Bryobacterales |
| Family | Bryobacteraceae |
| Genus | Paludibaculum |
| Species | Paludibaculum fermentans |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MPFLNRREFL LTSAAAGLAA APTSAHSELP FRQVHLDFHT SELIPDVAAD FDAREFAATL | 60 |
| KAAHVNSINV FAKCHHGLAY YDTAIATRHP ALKIDLLGQM VTACRAAGIH VLYYYSLVWD | 120 |
| VATSRKHPDW MVVTRDGQNI GGSPTDAWPW ICMNTPYLDQ VLAENEELVT KYDADGAWFD | 180 |
| ILKQHPDGCF CHWCTADRKK LGLKDDPESI RTHNKLVAKR VEEGLNKVVH KRFPNGLTFY | 240 |
| NSRLVVGVRD ELDYYSHIEI ESLPTGGWGY THFQQRVRYM RTLGKDMVGM TGRFHKSWGD | 300 |
| FGGLKNQAAL DFECLNFLAN GAKACVGDQL HPRGRLDKTT YARIGKTYTK VEALEPWARG | 360 |
| AKAVADIGVV STALFNTETT QKITPADQGF TNMLVELHQQ FNVIDLAEDF RRYKLLILPD | 420 |
| EIRPSKELLA KLDEFVTAGG SVIASAESLL DPRMYWFYWK PLGIRYQGKA KFRGEYMLAR | 480 |
| PGAFPSLDES AYFLYQPGHS VAVDEGTEVL ATYGHPYFDR TPEHFSSHKQ TPLGQRTEEP | 540 |
| LITLRGKVCY IANPLFRSYA LDGVGAYKLV VGDLLQRLMP QPALTAPKLP STAQVTLLEQ | 600 |
| PESKRRIVHL LHYPMTRRAP DIDIIEEPGL LLDQEIRLRL AAPPRRVTLV PQNKPLPFRF | 660 |
| ENGYAVCRVE KVIGHQAICF E | 681 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.12 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MPFLNRREFL LTSAAAGLAA APTSAHSELP FRQVHLDFHT SELIPDVAAD FDAREFAATL | 60 |
| KAAHVNSINV FAKCHHGLAY YDTAIATRHP ALKIDLLGQM VTACRAAGIH VLYYYSLVWD | 120 |
| VATSRKHPDW MVVTRDGQNI GGSPTDAWPW ICMNTPYLDQ VLAENEELVT KYDADGAWFD | 180 |
| ILKQHPDGCF CHWCTADRKK LGLKDDPESI RTHNKLVAKR VEEGLNKVVH KRFPNGLTFY | 240 |
| NSRLVVGVRD ELDYYSHIEI ESLPTGGWGY THFQQRVRYM RTLGKDMVGM TGRFHKSWGD | 300 |
| FGGLKNQAAL DFECLNFLAN GAKACVGDQL HPRGRLDKTT YARIGKTYTK VEALEPWARG | 360 |
| AKAVADIGVV STALFNTETT QKITPADQGF TNMLVELHQQ FNVIDLAEDF RRYKLLILPD | 420 |
| EIRPSKELLA KLDEFVTAGG SVIASAESLL DPRMYWFYWK PLGIRYQGKA KFRGEYMLAR | 480 |
| PGAFPSLDES AYFLYQPGHS VAVDEGTEVL ATYGHPYFDR TPEHFSSHKQ TPLGQRTEEP | 540 |
| LITLRGKVCY IANPLFRSYA LDGVGAYKLV VGDLLQRLMP QPALTAPKLP STAQVTLLEQ | 600 |
| PESKRRIVHL LHYPMTRRAP DIDIIEEPGL LLDQEIRLRL AAPPRRVTLV PQNKPLPFRF | 660 |
| ENGYAVCRVE KVIGHQAICF E | 681 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.