Information for CAZyme ID: QOQ98950.1
Basic Information
| GenBank ID | QOQ98950.1 |
| Family | GT107 |
| Sequence Length | 675 |
| UniProt ID | A0A7M1MDZ2(100,100) |
| Average pLDDT? | 90.49 |
| CAZy50 ID | 12416 |
| CAZy50 Rep | No, AWI34020.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 201 |
| Kingdom | Bacteria |
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Campylobacteraceae |
| Genus | Campylobacter |
| Species | Campylobacter lari |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKFYTVSKKL KENVKNFYKI ALYHAYKNIT KEDVFVGWGR KKSGLRAIEL AKKHNAKFLL | 60 |
| LEDGFLRSLN LGVENSPSFS IVKDDIGIYY DATMPSKFEN ILNTYEFSAE ELEQAKKAIE | 120 |
| LIKKEKLSKY NNNLCVPKEL FSANEERVLI ITQIANDASL KFGLADNFST QDIINEAIKE | 180 |
| NPNTKIYIKI HPDVLSGKKQ SDFNAQDLPS KCVVIKENYN PIELLSYFKK VYTKTSGMGF | 240 |
| EALMSGCECV CYGVPFYAGW GLTQDKQMCK RRLKKRSLEE VFCAAYILYS EYFNPYLNQK | 300 |
| SDIFDTIYTL AKYKKIEQAN SNTLYFLGFT LWKRWFMRPF FKAKNNKIIF LNSLDELYKA | 360 |
| NLNPEDKIFI WGKKYDKTLL AKDFNNEIFL VEDGFLRSVF LGSDLTRPFS LIIDCKGLYV | 420 |
| DPSKPSDLED ILQNHIFDES LKQRAKKLIT TITQNKFSKY NGLKHEKINF NTNKKIILIP | 480 |
| AQVEDDASMI LGGAGFDTLK LLQSVRGANE NAFIVFKPHP DVLSGNRKGL KDKSIILKYC | 540 |
| DEIIENVSID SAINASDEVH TITSTSGFDA LLRGKKVVVY GKPFYAGWGL TTDLHEIPRR | 600 |
| TRVLSLEELV AGVLILYPRY IHPKSKNLCE VELALDIMLK MQKDYFSKFY LRWFMDIRIY | 660 |
| ILRKIRRLIE FILIR | 675 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.49 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT107(24-313)+GT107(289-646)
| MKFYTVSKKL KENVKNFYKI ALYHAYKNIT KEDVFVGWGR KKSGLRAIEL AKKHNAKFLL | 60 |
| LEDGFLRSLN LGVENSPSFS IVKDDIGIYY DATMPSKFEN ILNTYEFSAE ELEQAKKAIE | 120 |
| LIKKEKLSKY NNNLCVPKEL FSANEERVLI ITQIANDASL KFGLADNFST QDIINEAIKE | 180 |
| NPNTKIYIKI HPDVLSGKKQ SDFNAQDLPS KCVVIKENYN PIELLSYFKK VYTKTSGMGF | 240 |
| EALMSGCECV CYGVPFYAGW GLTQDKQMCK RRLKKRSLEE VFCAAYILYS EYFNPYLNQK | 300 |
| SDIFDTIYTL AKYKKIEQAN SNTLYFLGFT LWKRWFMRPF FKAKNNKIIF LNSLDELYKA | 360 |
| NLNPEDKIFI WGKKYDKTLL AKDFNNEIFL VEDGFLRSVF LGSDLTRPFS LIIDCKGLYV | 420 |
| DPSKPSDLED ILQNHIFDES LKQRAKKLIT TITQNKFSKY NGLKHEKINF NTNKKIILIP | 480 |
| AQVEDDASMI LGGAGFDTLK LLQSVRGANE NAFIVFKPHP DVLSGNRKGL KDKSIILKYC | 540 |
| DEIIENVSID SAINASDEVH TITSTSGFDA LLRGKKVVVY GKPFYAGWGL TTDLHEIPRR | 600 |
| TRVLSLEELV AGVLILYPRY IHPKSKNLCE VELALDIMLK MQKDYFSKFY LRWFMDIRIY | 660 |
| ILRKIRRLIE FILIR | 675 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.