Information for CAZyme ID: QNL39961.1
Basic Information
GenBank ID | QNL39961.1 |
Family | PL6_1 |
Sequence Length | 758 |
UniProt ID | A0A412D6T6(100,100)![]() |
Average pLDDT? | 94.48 |
CAZy50 ID | 31859 |
CAZy50 Rep | Yes, QNL39961.1 |
Structure Cluster | SC_PL6_clus22 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2763022 |
Kingdom | Bacteria |
Phylum | Bacteroidota |
Class | Bacteroidia |
Order | Bacteroidales |
Family | Bacteroidaceae |
Genus | Bacteroides |
Species | Bacteroides sp. M10 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MMTRKIHKAI IASLLIGLPF TSFAKRYDVT LPEVASCLKT AQPGDQIYIK DGQYKDMQLK | 60 |
WTGKGTEKAP IKIEALNPGK VKIEGGSTLW IAGEWMSVDG LHFTDGYAPK GSVIEFRNGQ | 120 |
ELANHCRLTN CVIDGFNPSR RDQAYSYILL YGRHNRVDHC SLTGKLNLGV TLIVILNDER | 180 |
CLENHHQIDH NYFGERPVYG SNGAETMRVG TSQQAYSSSN TIIENNLFER CSGEVEVISI | 240 |
KSSDNVIRNN ILLECEGVVA LRHGDRNTVN NNLFIGNGLR NTGGIRVVNA GHQIYDNTLV | 300 |
GLAGTRFFSA LGVMDAVPNS LPNRYCQVVD VKMYRNTFVD CTNIEFGTGK DMERTLAPDN | 360 |
VSFTDNIIIN KELSQPYIAV DDVSGIQFKG NKVQLAKNYS APGFTTEKLK APQLPDQAAI | 420 |
RKDKGASWFE NRVAQPSAKT HKEYNAAPGT DLSEIIRSAE PGGIIVLAKG TYPIQSAMFI | 480 |
DKPLTIRAAN AANKPLVRFN GEKPDNMVTI ADGGELIIEN IAFDGVLEPG KALAKAGIST | 540 |
AIDMIQPYTL TVDGCEFQNF GEGGFFAIKG TKATFAKSVT IKNCFFRDLS GDAINYAAEK | 600 |
DDIGRYNADD MLIENCSFYR LLGLPINIYR GGSDESTAGP YITIRHCNFA DCCNKERGSV | 660 |
MRLIGPQVLT VENCNFDNSG RGGATIRLDE ATWEKVRIAN CNLWNSGRMV TTTSQAIQGK | 720 |
MYNIRPAYIN ADAYNYTPVP GSELEKLSIG LKKNSLPQ | 758 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.48 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MMTRKIHKAI IASLLIGLPF TSFAKRYDVT LPEVASCLKT AQPGDQIYIK DGQYKDMQLK | 60 |
WTGKGTEKAP IKIEALNPGK VKIEGGSTLW IAGEWMSVDG LHFTDGYAPK GSVIEFRNGQ | 120 |
ELANHCRLTN CVIDGFNPSR RDQAYSYILL YGRHNRVDHC SLTGKLNLGV TLIVILNDER | 180 |
CLENHHQIDH NYFGERPVYG SNGAETMRVG TSQQAYSSSN TIIENNLFER CSGEVEVISI | 240 |
KSSDNVIRNN ILLECEGVVA LRHGDRNTVN NNLFIGNGLR NTGGIRVVNA GHQIYDNTLV | 300 |
GLAGTRFFSA LGVMDAVPNS LPNRYCQVVD VKMYRNTFVD CTNIEFGTGK DMERTLAPDN | 360 |
VSFTDNIIIN KELSQPYIAV DDVSGIQFKG NKVQLAKNYS APGFTTEKLK APQLPDQAAI | 420 |
RKDKGASWFE NRVAQPSAKT HKEYNAAPGT DLSEIIRSAE PGGIIVLAKG TYPIQSAMFI | 480 |
DKPLTIRAAN AANKPLVRFN GEKPDNMVTI ADGGELIIEN IAFDGVLEPG KALAKAGIST | 540 |
AIDMIQPYTL TVDGCEFQNF GEGGFFAIKG TKATFAKSVT IKNCFFRDLS GDAINYAAEK | 600 |
DDIGRYNADD MLIENCSFYR LLGLPINIYR GGSDESTAGP YITIRHCNFA DCCNKERGSV | 660 |
MRLIGPQVLT VENCNFDNSG RGGATIRLDE ATWEKVRIAN CNLWNSGRMV TTTSQAIQGK | 720 |
MYNIRPAYIN ADAYNYTPVP GSELEKLSIG LKKNSLPQ | 758 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.