Information for CAZyme ID: QNK81974.1
Basic Information
GenBank ID | QNK81974.1 |
Family | CBM11, GH3 |
Sequence Length | 1064 |
UniProt ID | A0A7G8WNN1(100,100)![]() |
Average pLDDT? | 90.91 |
CAZy50 ID | 11704 |
CAZy50 Rep | Yes, QNK81974.1 |
Structure Cluster | SC_CBM11_clus4, SC_GH3_clus73 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2762325 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Nakamurellales |
Family | Nakamurellaceae |
Genus | Nakamurella |
Species | Nakamurella sp. PAMC28650 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MNRNRSRHYR ALTGKLRRKV AAISPAILVL SLVTVAAAPP AAAVSGPLPL IENFEGSVPL | 60 |
GTGTPGLFGF GSDAASIPKL AVAAAADLPG AVADNHALDV PYTVGGYGGF SYDLSAAQDW | 120 |
SPFGGFSFWV EGTGSGQKVE YEIKDGGADA SHSELWQGFF TDTAAGWHQV LEPFAGLVRR | 180 |
GDYQPPGAPS DGVLDLTSMW GFAVNLPSGA SGHLVFDEFS LYGHSSAKFS ATSSTYLVNA | 240 |
GQSASVGVKL LLASGVLLTA PVSVSYRLGG GTAVTGTDFT AASGAVTFPA GSTALTVETI | 300 |
AVPTSAGTPA GESKSIPVNL SSADATLVGP SPVVVINAHG LPYLDRKLPV AARVADLMKR | 360 |
MSLAEKVGQM TQAERAAVGD GTDITRYALG SLLSGGGSVP TPNTPAAWAD MVDGYQTQAL | 420 |
STPLQIPLIY GIDSVHGDNN LSGATLFPHN IGMGATRDPA LARQEGVVTA TETRATGIPW | 480 |
AFAPCVCVTR DERWGRSYES FGEDPSLVSQ METVIDGLQG NGNLAGKTSV LATAKHFLGD | 540 |
GGTKYGSSTT NDYKIDQGVT YATPAQLNAL YLAPFKTAVD KGVGSVMPSY SSLQILGQDT | 600 |
APIKMHARAD LITGVLKNQL GFKGFVISDY AAIDQIGPDY KSDVKIGINA DLDMIMVPNN | 660 |
YATFISDLTA LNASGDVSTA RIDDAVARIL TQKFALGLFD HPMADRSNAS TIGSAAHRAV | 720 |
ARRAVAESQV LFKNSGNLLP LAKNARIYVA GSLADNVGNQ SGGWTLTWQG QSGEIPGGTS | 780 |
ILAGIRQVAP HATVTYSATA ATPTAGSTVG IVAVGDTPYA EGMGDVGVNG HGLQLSVADR | 840 |
NAVDTVCGAM RCVVLDVSGR PLDLTGIVPE ATAVVASWLP GTEGAGVADV LFGNRPFTGR | 900 |
LPVTWVKAES QLPMNLGDKN YDPLFPYGWG LRTDPDRNRL QVLRDQLERQ SGAAGAVRSL | 960 |
DVVLSQRNWA ADGSTRNADQ LLDRLKSLAG VMSDGRKFSF VQQDVLVSVA RDLAQRAIVD | 1020 |
GGSAAMSATA SLTSGADHDI AGGHPVQAIT GLIKARMVAL AVSP | 1064 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.91 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MNRNRSRHYR ALTGKLRRKV AAISPAILVL SLVTVAAAPP AAAVSGPLPL IENFEGSVPL | 60 |
GTGTPGLFGF GSDAASIPKL AVAAAADLPG AVADNHALDV PYTVGGYGGF SYDLSAAQDW | 120 |
SPFGGFSFWV EGTGSGQKVE YEIKDGGADA SHSELWQGFF TDTAAGWHQV LEPFAGLVRR | 180 |
GDYQPPGAPS DGVLDLTSMW GFAVNLPSGA SGHLVFDEFS LYGHSSAKFS ATSSTYLVNA | 240 |
GQSASVGVKL LLASGVLLTA PVSVSYRLGG GTAVTGTDFT AASGAVTFPA GSTALTVETI | 300 |
AVPTSAGTPA GESKSIPVNL SSADATLVGP SPVVVINAHG LPYLDRKLPV AARVADLMKR | 360 |
MSLAEKVGQM TQAERAAVGD GTDITRYALG SLLSGGGSVP TPNTPAAWAD MVDGYQTQAL | 420 |
STPLQIPLIY GIDSVHGDNN LSGATLFPHN IGMGATRDPA LARQEGVVTA TETRATGIPW | 480 |
AFAPCVCVTR DERWGRSYES FGEDPSLVSQ METVIDGLQG NGNLAGKTSV LATAKHFLGD | 540 |
GGTKYGSSTT NDYKIDQGVT YATPAQLNAL YLAPFKTAVD KGVGSVMPSY SSLQILGQDT | 600 |
APIKMHARAD LITGVLKNQL GFKGFVISDY AAIDQIGPDY KSDVKIGINA DLDMIMVPNN | 660 |
YATFISDLTA LNASGDVSTA RIDDAVARIL TQKFALGLFD HPMADRSNAS TIGSAAHRAV | 720 |
ARRAVAESQV LFKNSGNLLP LAKNARIYVA GSLADNVGNQ SGGWTLTWQG QSGEIPGGTS | 780 |
ILAGIRQVAP HATVTYSATA ATPTAGSTVG IVAVGDTPYA EGMGDVGVNG HGLQLSVADR | 840 |
NAVDTVCGAM RCVVLDVSGR PLDLTGIVPE ATAVVASWLP GTEGAGVADV LFGNRPFTGR | 900 |
LPVTWVKAES QLPMNLGDKN YDPLFPYGWG LRTDPDRNRL QVLRDQLERQ SGAAGAVRSL | 960 |
DVVLSQRNWA ADGSTRNADQ LLDRLKSLAG VMSDGRKFSF VQQDVLVSVA RDLAQRAIVD | 1020 |
GGSAAMSATA SLTSGADHDI AGGHPVQAIT GLIKARMVAL AVSP | 1064 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.