Information for CAZyme ID: QNK58215.1
Basic Information
| GenBank ID | QNK58215.1 |
| Family | PL37 |
| Sequence Length | 610 |
| UniProt ID | A0A7G8UQS2(100,100) |
| Average pLDDT? | 89.79 |
| CAZy50 ID | 51045 |
| CAZy50 Rep | Yes, QNK58215.1 |
| Structure Cluster | SC_PL37_clus1 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2762320 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Bacillales |
| Family | Paenibacillaceae |
| Genus | Paenibacillus |
| Species | Paenibacillus sp. PAMC21692 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MLDILRHCCD LLVEEQVRDV WNGSLGGIWC TGCQTVHGRS GDAIFPLYYL YSISKEEKYR | 60 |
| DAARSLFRYI IAAQEGDGAW RNEPEADWKG TTVFQLLALC HAYDQLTDQE DGEALKPVIA | 120 |
| KAAAWVSATF GDGGDTNVNY YLSSALALLL SDRILGKPEY GGQAKRLMHG CIDTRLSRDG | 180 |
| WLFGEKTRMR PFTQMTSTVD IGYNLDMSLG VMAEYAKLTG DPKVMSAALL ALAKHMEMVY | 240 |
| PDGSIDNSFG SRNYKWTLFG SKTAHGSQMA FMLLADKNAA FYRAARLHTN YLASCIRSAD | 300 |
| GRFGYGPMHE QLFEHGCIHP TINRADALAV ALAYGAESGQ REHEDRDDTR DQVKLPSEIL | 360 |
| FGAKSYKELA VHQLRSHEWM ATISCSAVRN APTGGTVGYL WHRAVGAVQL GGMTVYRQYE | 420 |
| EFNMPKAMPG MEEPIAPRIE VSREGRLYSN LYEHDAYAKA AAVNNADSRE NENGAAGAAA | 480 |
| VVHGKLKAMD EGSCYDCAAF YRIDYELEGD DFIKRYEIDV RLACDNIAIV EPIVTDRAAV | 540 |
| AQADGRIQVE VLHQRQLMLR ASGHSFVLDP GSLARRTVSI FPSVITVPLR WNTGKVAPGI | 600 |
| YRFQIKMRIK | 610 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.79 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MLDILRHCCD LLVEEQVRDV WNGSLGGIWC TGCQTVHGRS GDAIFPLYYL YSISKEEKYR | 60 |
| DAARSLFRYI IAAQEGDGAW RNEPEADWKG TTVFQLLALC HAYDQLTDQE DGEALKPVIA | 120 |
| KAAAWVSATF GDGGDTNVNY YLSSALALLL SDRILGKPEY GGQAKRLMHG CIDTRLSRDG | 180 |
| WLFGEKTRMR PFTQMTSTVD IGYNLDMSLG VMAEYAKLTG DPKVMSAALL ALAKHMEMVY | 240 |
| PDGSIDNSFG SRNYKWTLFG SKTAHGSQMA FMLLADKNAA FYRAARLHTN YLASCIRSAD | 300 |
| GRFGYGPMHE QLFEHGCIHP TINRADALAV ALAYGAESGQ REHEDRDDTR DQVKLPSEIL | 360 |
| FGAKSYKELA VHQLRSHEWM ATISCSAVRN APTGGTVGYL WHRAVGAVQL GGMTVYRQYE | 420 |
| EFNMPKAMPG MEEPIAPRIE VSREGRLYSN LYEHDAYAKA AAVNNADSRE NENGAAGAAA | 480 |
| VVHGKLKAMD EGSCYDCAAF YRIDYELEGD DFIKRYEIDV RLACDNIAIV EPIVTDRAAV | 540 |
| AQADGRIQVE VLHQRQLMLR ASGHSFVLDP GSLARRTVSI FPSVITVPLR WNTGKVAPGI | 600 |
| YRFQIKMRIK | 610 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.