CAZyme3D

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Entry ID

Information for CAZyme ID: QMW36292.1

Basic Information

GenBank IDQMW36292.1
FamilyAA3
Sequence Length260
UniProt IDA0A7G5JL00(100,100)Download
Average pLDDT?81.73
CAZy50 ID169176
CAZy50 RepYes, QMW36292.1
Structure ClusterSC_AA3_clus87
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID332952
KingdomEukaryota
PhylumAscomycota
ClassEurotiomycetes
OrderEurotiales
FamilyAspergillaceae
GenusAspergillus
SpeciesAspergillus flavus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLINRLFGIL  TLSVILTYAI  DLKGYKYIVV  GSGAGGGPLA  ARLALAGHKT  LLLEAGNDQG60
HNLNYSNFYV  QHYPDEARQA  RNLNTVYGTP  DGRQHIGIDP  PPGSNIKGIL  YPRAGTLGGC120
TAHNVLVAIY  PYRSDFDYMA  ELTGDSSWRA  ENMLKYFVGL  EKNGYLPPGK  RGHGYNACLG180
IETSPLRLVL  QDHAMCTCPI  GTDDDPMAVL  DSKFLVREVH  RLRVVDGSAL  PRISGTFPVL240
SIRMMAEKAA  DVILSEIGTN  260

Predicted 3D structure by AlphaFold2 with pLDDT = 81.73 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MLINRLFGIL  TLSVILTYAI  DLKGYKYIVV  GSGAGGGPLA  ARLALAGHKT  LLLEAGNDQG60
HNLNYSNFYV  QHYPDEARQA  RNLNTVYGTP  DGRQHIGIDP  PPGSNIKGIL  YPRAGTLGGC120
TAHNVLVAIY  PYRSDFDYMA  ELTGDSSWRA  ENMLKYFVGL  EKNGYLPPGK  RGHGYNACLG180
IETSPLRLVL  QDHAMCTCPI  GTDDDPMAVL  DSKFLVREVH  RLRVVDGSAL  PRISGTFPVL240
SIRMMAEKAA  DVILSEIGTN  260

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) :

MLINRLFGIL  TLSVILTYAI  DLKGYKYIVV  GSGAGGGPLA  ARLALAGHKT  LLLEAGNDQG60
HNLNYSNFYV  QHYPDEARQA  RNLNTVYGTP  DGRQHIGIDP  PPGSNIKGIL  YPRAGTLGGC120
TAHNVLVAIY  PYRSDFDYMA  ELTGDSSWRA  ENMLKYFVGL  EKNGYLPPGK  RGHGYNACLG180
IETSPLRLVL  QDHAMCTCPI  GTDDDPMAVL  DSKFLVREVH  RLRVVDGSAL  PRISGTFPVL240
SIRMMAEKAA  DVILSEIGTN  260

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help