CAZyme3D

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Entry ID

Information for CAZyme ID: QIX00265.1

Basic Information

GenBank IDQIX00265.1
FamilyGH17
Sequence Length590
UniProt IDA0A6H0Y026(100,100)Download
Average pLDDT?81.25
CAZy50 ID53766
CAZy50 RepYes, QIX00265.1
Structure ClusterSC_GH17_clus116
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID286661
KingdomEukaryota
PhylumAscomycota
ClassDothideomycetes
Order
Family
GenusPeltaster
SpeciesPeltaster fructicola

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKTTSLLALA  GSASAAIQGF  NYGSTFTSGA  AKAQSDFEAE  FSRAQTLQGT  SGWTSARLYT60
MIQAGTANTP  ISAIPAAIST  KTGLLLGMWA  SAGQASFDNE  IAALKSAISQ  YGTAFTDLIQ120
GISVGSEDLY  RITPTGIENM  SGAGANPDDL  VSYIKQVRAA  ISGTSASGKS  IGHVDTWTAW180
TNSSNNAVIS  AVDWLGFDGY  PYFQTVNSNG  IENAQSLFQQ  SYDATVAAAQ  GKDVWVTETG240
WPVSGPNENQ  AVASVENAKT  YWDEVACALI  GKTNTFWYTL  QDAAPTTPSP  SFGLVGSDLS300
SAPLFDLSCP  AGSSGASASS  SMASSSAAAV  TSSVASATAP  GTTAASTTVS  VVVTPGVESG360
SLSVATGDAS  VAQTITVTVT  THLPLESCPA  TCANTPTTML  TAASSQTATP  PAPATSSATT420
PATPSGSNCP  TNLNGAYQYP  HLIVPVDSSK  PTTAFGTSYN  GTVSSTVSTI  FNFDIPQSYS480
GETCSLVFLF  PQLNQLETSS  YSFNDKGGIS  VAQLSSPATQ  QTTYNSISSE  SNANYGSISS540
LQRGNGYVVN  TFSCPAGQTV  SYLFSGTGDI  SLNWFNDWNP  SPLGAFITVC  590

Predicted 3D structure by AlphaFold2 with pLDDT = 81.25 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MKTTSLLALA  GSASAAIQGF  NYGSTFTSGA  AKAQSDFEAE  FSRAQTLQGT  SGWTSARLYT60
MIQAGTANTP  ISAIPAAIST  KTGLLLGMWA  SAGQASFDNE  IAALKSAISQ  YGTAFTDLIQ120
GISVGSEDLY  RITPTGIENM  SGAGANPDDL  VSYIKQVRAA  ISGTSASGKS  IGHVDTWTAW180
TNSSNNAVIS  AVDWLGFDGY  PYFQTVNSNG  IENAQSLFQQ  SYDATVAAAQ  GKDVWVTETG240
WPVSGPNENQ  AVASVENAKT  YWDEVACALI  GKTNTFWYTL  QDAAPTTPSP  SFGLVGSDLS300
SAPLFDLSCP  AGSSGASASS  SMASSSAAAV  TSSVASATAP  GTTAASTTVS  VVVTPGVESG360
SLSVATGDAS  VAQTITVTVT  THLPLESCPA  TCANTPTTML  TAASSQTATP  PAPATSSATT420
PATPSGSNCP  TNLNGAYQYP  HLIVPVDSSK  PTTAFGTSYN  GTVSSTVSTI  FNFDIPQSYS480
GETCSLVFLF  PQLNQLETSS  YSFNDKGGIS  VAQLSSPATQ  QTTYNSISSE  SNANYGSISS540
LQRGNGYVVN  TFSCPAGQTV  SYLFSGTGDI  SLNWFNDWNP  SPLGAFITVC  590

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH17(45-298)

MKTTSLLALA  GSASAAIQGF  NYGSTFTSGA  AKAQSDFEAE  FSRAQTLQGT  SGWTSARLYT60
MIQAGTANTP  ISAIPAAIST  KTGLLLGMWA  SAGQASFDNE  IAALKSAISQ  YGTAFTDLIQ120
GISVGSEDLY  RITPTGIENM  SGAGANPDDL  VSYIKQVRAA  ISGTSASGKS  IGHVDTWTAW180
TNSSNNAVIS  AVDWLGFDGY  PYFQTVNSNG  IENAQSLFQQ  SYDATVAAAQ  GKDVWVTETG240
WPVSGPNENQ  AVASVENAKT  YWDEVACALI  GKTNTFWYTL  QDAAPTTPSP  SFGLVGSDLS300
SAPLFDLSCP  AGSSGASASS  SMASSSAAAV  TSSVASATAP  GTTAASTTVS  VVVTPGVESG360
SLSVATGDAS  VAQTITVTVT  THLPLESCPA  TCANTPTTML  TAASSQTATP  PAPATSSATT420
PATPSGSNCP  TNLNGAYQYP  HLIVPVDSSK  PTTAFGTSYN  GTVSSTVSTI  FNFDIPQSYS480
GETCSLVFLF  PQLNQLETSS  YSFNDKGGIS  VAQLSSPATQ  QTTYNSISSE  SNANYGSISS540
LQRGNGYVVN  TFSCPAGQTV  SYLFSGTGDI  SLNWFNDWNP  SPLGAFITVC  590

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help