CAZyme3D

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Entry ID

Information for CAZyme ID: QIW96695.1

Basic Information

GenBank IDQIW96695.1
FamilyGH135
Sequence Length265
UniProt IDA0A6H0XPT2(100,100)Download
Average pLDDT?90.64
CAZy50 ID167594
CAZy50 RepYes, QIW96695.1
Structure ClusterSC_GH135_clus27
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID286661
KingdomEukaryota
PhylumAscomycota
ClassDothideomycetes
Order
Family
GenusPeltaster
SpeciesPeltaster fructicola

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MMPGMPELSG  IRERLNSFVE  EMHSPSTRDM  REPLAVAVPL  YIYPGEGCWD  ALYNAMVKHP60
SVEFHVVINP  ANGPGGRVPD  ACYVKEVARL  NSFDNCKLFG  YVHVSWGARK  AGLVTGDITT120
WAHWKDYSAA  DIHVEGIFVD  EAPADLDKLE  YMEDIYKHTK  YVLGDNALVW  TNPGVALDER180
FYEVADLVNS  HENTHEGWKT  CIHSRNVKST  AMIHTYDGDL  TDMRRDIQVL  RKAGYRSILI240
TTSNCYVSFS  NYLEQFVEAV  ESSNQ265

Predicted 3D structure by AlphaFold2 with pLDDT = 90.64 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MMPGMPELSG  IRERLNSFVE  EMHSPSTRDM  REPLAVAVPL  YIYPGEGCWD  ALYNAMVKHP60
SVEFHVVINP  ANGPGGRVPD  ACYVKEVARL  NSFDNCKLFG  YVHVSWGARK  AGLVTGDITT120
WAHWKDYSAA  DIHVEGIFVD  EAPADLDKLE  YMEDIYKHTK  YVLGDNALVW  TNPGVALDER180
FYEVADLVNS  HENTHEGWKT  CIHSRNVKST  AMIHTYDGDL  TDMRRDIQVL  RKAGYRSILI240
TTSNCYVSFS  NYLEQFVEAV  ESSNQ265

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH135(36-258)

MMPGMPELSG  IRERLNSFVE  EMHSPSTRDM  REPLAVAVPL  YIYPGEGCWD  ALYNAMVKHP60
SVEFHVVINP  ANGPGGRVPD  ACYVKEVARL  NSFDNCKLFG  YVHVSWGARK  AGLVTGDITT120
WAHWKDYSAA  DIHVEGIFVD  EAPADLDKLE  YMEDIYKHTK  YVLGDNALVW  TNPGVALDER180
FYEVADLVNS  HENTHEGWKT  CIHSRNVKST  AMIHTYDGDL  TDMRRDIQVL  RKAGYRSILI240
TTSNCYVSFS  NYLEQFVEAV  ESSNQ265

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help