Information for CAZyme ID: QIL48940.1
Basic Information
GenBank ID | QIL48940.1 |
Family | GH84 |
Sequence Length | 537 |
UniProt ID | A0A6G8AVC8(100,100)![]() |
Average pLDDT? | 95.77 |
CAZy50 ID | 61744 |
CAZy50 Rep | Yes, QIL48940.1 |
Structure Cluster | SC_GH84_clus15 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2714947 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Bacilli |
Order | Lactobacillales |
Family | Enterococcaceae |
Genus | Vagococcus |
Species | Vagococcus hydrophili |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRHYDEVMID REYSFVEKEK IVIRFEGYFF RFETYQAVID EELFCDYVTW QNNDVDTTFD | 60 |
FTLKHVYDRE LVHDSFSLKI GSDKVITIAT KTRRGFDYAQ KALVEMLVKK EKGILVKHGQ | 120 |
ISHTPSFEMR GIIEGFYGVP WTWDNRQDCI QLLVENQMNT YMYAPKDDEY QRKLWRELYP | 180 |
DSYLNEFKKL LKTAEEKKID FWYMISPGND IDYLKQSELE VLFTKLRQII DLGINHFGLL | 240 |
LDDIDYILKD KAKIKFGTSA KAHAYIVNQV DEFLSGELAN YQLVTCPTEY DNHHDAEYLE | 300 |
ILNNNLKPHI PLFWTGPSTL AAKISHENIQ KMAAVYQREF IIWDNVPVND FEKDHERLFL | 360 |
SPYDNRSKFL AEEKYHVRGI VLNPMAQWEW SKLTINHAAR YLWEVSSFNQ ETVWLESLKQ | 420 |
SFDEEYLEAV QVFLKHNHNR HTHNVRSFEM EQALEMKDKN KLSEWLIELN VAIEKLSELE | 480 |
NHPMIKEGTP WFERAKLDFE LWQAILASDK VKVEELKEVC QKSNYRIGTD LVMGYLG | 537 |
Predicted 3D structure by AlphaFold2 with pLDDT = 95.77 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MRHYDEVMID REYSFVEKEK IVIRFEGYFF RFETYQAVID EELFCDYVTW QNNDVDTTFD | 60 |
FTLKHVYDRE LVHDSFSLKI GSDKVITIAT KTRRGFDYAQ KALVEMLVKK EKGILVKHGQ | 120 |
ISHTPSFEMR GIIEGFYGVP WTWDNRQDCI QLLVENQMNT YMYAPKDDEY QRKLWRELYP | 180 |
DSYLNEFKKL LKTAEEKKID FWYMISPGND IDYLKQSELE VLFTKLRQII DLGINHFGLL | 240 |
LDDIDYILKD KAKIKFGTSA KAHAYIVNQV DEFLSGELAN YQLVTCPTEY DNHHDAEYLE | 300 |
ILNNNLKPHI PLFWTGPSTL AAKISHENIQ KMAAVYQREF IIWDNVPVND FEKDHERLFL | 360 |
SPYDNRSKFL AEEKYHVRGI VLNPMAQWEW SKLTINHAAR YLWEVSSFNQ ETVWLESLKQ | 420 |
SFDEEYLEAV QVFLKHNHNR HTHNVRSFEM EQALEMKDKN KLSEWLIELN VAIEKLSELE | 480 |
NHPMIKEGTP WFERAKLDFE LWQAILASDK VKVEELKEVC QKSNYRIGTD LVMGYLG | 537 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.